Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CBX1P83916 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.26■□□□□ 0.19
CBX1P83916 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CBX1P83916 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC16.25■□□□□ 0.19
CBX1P83916 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.25■□□□□ 0.19
CBX1P83916 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CBX1P83916 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CBX1P83916 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CBX1P83916 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
CBX1P83916 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CBX1P83916 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC16.25■□□□□ 0.19
CBX1P83916 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CBX1P83916 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CBX1P83916 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CBX1P83916 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CBX1P83916 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CBX1P83916 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
CBX1P83916 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CBX1P83916 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CBX1P83916 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.25■□□□□ 0.19
CBX1P83916 ECEL1P2-202ENST00000465689 757 ntBASIC16.25■□□□□ 0.19
CBX1P83916 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CBX1P83916 PENK-204ENST00000518770 863 ntTSL 2 BASIC16.25■□□□□ 0.19
CBX1P83916 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CBX1P83916 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.25■□□□□ 0.19
CBX1P83916 CD99P1-205ENST00000527459 561 ntBASIC16.25■□□□□ 0.19
CBX1P83916 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.25■□□□□ 0.19
CBX1P83916 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.25■□□□□ 0.19
CBX1P83916 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CBX1P83916 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CBX1P83916 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CBX1P83916 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.25■□□□□ 0.19
CBX1P83916 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CBX1P83916 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CBX1P83916 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CBX1P83916 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CBX1P83916 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CBX1P83916 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CBX1P83916 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CBX1P83916 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CBX1P83916 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CBX1P83916 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC16.25■□□□□ 0.19
CBX1P83916 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CBX1P83916 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC16.25■□□□□ 0.19
CBX1P83916 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CBX1P83916 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CBX1P83916 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CBX1P83916 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CBX1P83916 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.25■□□□□ 0.19
CBX1P83916 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.25■□□□□ 0.19
CBX1P83916 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
CBX1P83916 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CBX1P83916 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CBX1P83916 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CBX1P83916 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CBX1P83916 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CBX1P83916 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CBX1P83916 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CBX1P83916 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC16.24■□□□□ 0.19
CBX1P83916 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CBX1P83916 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CBX1P83916 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CBX1P83916 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC16.24■□□□□ 0.19
CBX1P83916 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CBX1P83916 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CBX1P83916 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CBX1P83916 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CBX1P83916 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.24■□□□□ 0.19
CBX1P83916 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CBX1P83916 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.24■□□□□ 0.19
CBX1P83916 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC16.24■□□□□ 0.19
CBX1P83916 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.24■□□□□ 0.19
CBX1P83916 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.24■□□□□ 0.19
CBX1P83916 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.24■□□□□ 0.19
CBX1P83916 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC16.24■□□□□ 0.19
CBX1P83916 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.24■□□□□ 0.19
CBX1P83916 AC010653.2-201ENST00000623505 997 ntBASIC16.24■□□□□ 0.19
CBX1P83916 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CBX1P83916 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CBX1P83916 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CBX1P83916 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CBX1P83916 MIR193BHG-211ENST00000641433 5365 ntBASIC16.24■□□□□ 0.19
CBX1P83916 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CBX1P83916 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CBX1P83916 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CBX1P83916 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC16.24■□□□□ 0.19
CBX1P83916 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CBX1P83916 AL353692.3-201ENST00000407031 1396 ntBASIC16.24■□□□□ 0.19
CBX1P83916 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CBX1P83916 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
CBX1P83916 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC16.24■□□□□ 0.19
CBX1P83916 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC16.23■□□□□ 0.19
CBX1P83916 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC16.23■□□□□ 0.19
CBX1P83916 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CBX1P83916 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CBX1P83916 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CBX1P83916 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
CBX1P83916 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC16.23■□□□□ 0.19
CBX1P83916 BNIP3P1-202ENST00000550043 1585 ntBASIC16.23■□□□□ 0.19
CBX1P83916 KRT8P24-201ENST00000560290 1559 ntBASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms