Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
CKS1BP61024 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC11.01□□□□□ -0.65
CKS1BP61024 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CKS1BP61024 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC11.01□□□□□ -0.65
CKS1BP61024 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
CKS1BP61024 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CKS1BP61024 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC11.01□□□□□ -0.65
CKS1BP61024 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
CKS1BP61024 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CKS1BP61024 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC11.01□□□□□ -0.65
CKS1BP61024 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CKS1BP61024 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CKS1BP61024 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CKS1BP61024 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CKS1BP61024 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
CKS1BP61024 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CKS1BP61024 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
CKS1BP61024 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC11□□□□□ -0.65
CKS1BP61024 SNX33P1-201ENST00000592116 1762 ntBASIC11□□□□□ -0.65
CKS1BP61024 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC11□□□□□ -0.65
CKS1BP61024 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
CKS1BP61024 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC11□□□□□ -0.65
CKS1BP61024 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC11□□□□□ -0.65
CKS1BP61024 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CKS1BP61024 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
CKS1BP61024 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
CKS1BP61024 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC11□□□□□ -0.65
CKS1BP61024 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC11□□□□□ -0.65
CKS1BP61024 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC11□□□□□ -0.65
CKS1BP61024 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
CKS1BP61024 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
CKS1BP61024 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC11□□□□□ -0.65
CKS1BP61024 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CKS1BP61024 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
CKS1BP61024 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC11□□□□□ -0.65
CKS1BP61024 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC11□□□□□ -0.65
CKS1BP61024 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC11□□□□□ -0.65
CKS1BP61024 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC11□□□□□ -0.65
CKS1BP61024 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
CKS1BP61024 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
CKS1BP61024 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
CKS1BP61024 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CKS1BP61024 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CKS1BP61024 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC11□□□□□ -0.65
CKS1BP61024 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC11□□□□□ -0.65
CKS1BP61024 PAWRP1-201ENST00000451083 565 ntBASIC11□□□□□ -0.65
CKS1BP61024 BET1L-206ENST00000486280 665 ntTSL 3 BASIC11□□□□□ -0.65
CKS1BP61024 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC11□□□□□ -0.65
CKS1BP61024 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CKS1BP61024 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC11□□□□□ -0.65
CKS1BP61024 FICD-205ENST00000552758 603 ntTSL 2 BASIC11□□□□□ -0.65
CKS1BP61024 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC11□□□□□ -0.65
CKS1BP61024 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC11□□□□□ -0.65
CKS1BP61024 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC11□□□□□ -0.65
CKS1BP61024 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC11□□□□□ -0.65
CKS1BP61024 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC11□□□□□ -0.65
CKS1BP61024 NKAPP1-205ENST00000585790 367 ntBASIC11□□□□□ -0.65
CKS1BP61024 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC11□□□□□ -0.65
CKS1BP61024 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC11□□□□□ -0.65
CKS1BP61024 PPT1-213ENST00000641319 2388 ntBASIC11□□□□□ -0.65
CKS1BP61024 CIC-204ENST00000572681 8218 ntTSL 5 BASIC11□□□□□ -0.65
CKS1BP61024 HLCS-207ENST00000612277 6112 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
CKS1BP61024 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CKS1BP61024 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CKS1BP61024 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CKS1BP61024 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC11□□□□□ -0.65
CKS1BP61024 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
CKS1BP61024 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CKS1BP61024 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC11□□□□□ -0.65
CKS1BP61024 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC11□□□□□ -0.65
CKS1BP61024 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
CKS1BP61024 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
CKS1BP61024 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
CKS1BP61024 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC11□□□□□ -0.65
CKS1BP61024 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC11□□□□□ -0.65
CKS1BP61024 CTNNB1-201ENST00000349496 3737 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CKS1BP61024 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CKS1BP61024 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC11□□□□□ -0.65
CKS1BP61024 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
CKS1BP61024 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
CKS1BP61024 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC11□□□□□ -0.65
CKS1BP61024 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC11□□□□□ -0.65
CKS1BP61024 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC11□□□□□ -0.65
CKS1BP61024 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
CKS1BP61024 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
CKS1BP61024 PRR26-201ENST00000381489 7250 ntTSL 1 (best) BASIC11□□□□□ -0.65
CKS1BP61024 DNAJB12-201ENST00000338820 4360 ntTSL 2 BASIC11□□□□□ -0.65
CKS1BP61024 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
CKS1BP61024 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CKS1BP61024 C10orf105-202ENST00000441508 4836 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CKS1BP61024 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CKS1BP61024 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC11□□□□□ -0.65
CKS1BP61024 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CKS1BP61024 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
CKS1BP61024 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CKS1BP61024 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC10.99□□□□□ -0.65
CKS1BP61024 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC10.99□□□□□ -0.65
CKS1BP61024 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CKS1BP61024 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CKS1BP61024 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms