Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
VSX2P58304 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
VSX2P58304 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.9□□□□□ -0.02
VSX2P58304 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.9□□□□□ -0.02
VSX2P58304 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
VSX2P58304 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.9□□□□□ -0.02
VSX2P58304 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VSX2P58304 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.9□□□□□ -0.02
VSX2P58304 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VSX2P58304 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
VSX2P58304 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
VSX2P58304 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
VSX2P58304 AC144831.1-201ENST00000573312 2656 ntBASIC14.89□□□□□ -0.03
VSX2P58304 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VSX2P58304 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
VSX2P58304 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
VSX2P58304 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VSX2P58304 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VSX2P58304 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
VSX2P58304 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VSX2P58304 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.89□□□□□ -0.03
VSX2P58304 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VSX2P58304 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
VSX2P58304 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
VSX2P58304 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.89□□□□□ -0.03
VSX2P58304 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VSX2P58304 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.89□□□□□ -0.03
VSX2P58304 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
VSX2P58304 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
VSX2P58304 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.89□□□□□ -0.03
VSX2P58304 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.89□□□□□ -0.03
VSX2P58304 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
VSX2P58304 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
VSX2P58304 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VSX2P58304 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VSX2P58304 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VSX2P58304 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VSX2P58304 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.89□□□□□ -0.03
VSX2P58304 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
VSX2P58304 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC14.89□□□□□ -0.03
VSX2P58304 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
VSX2P58304 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
VSX2P58304 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.89□□□□□ -0.03
VSX2P58304 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
VSX2P58304 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.89□□□□□ -0.03
VSX2P58304 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.89□□□□□ -0.03
VSX2P58304 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
VSX2P58304 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.89□□□□□ -0.03
VSX2P58304 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.89□□□□□ -0.03
VSX2P58304 AC000095.1-201ENST00000603208 874 ntBASIC14.89□□□□□ -0.03
VSX2P58304 AL035252.4-201ENST00000624174 288 ntBASIC14.89□□□□□ -0.03
VSX2P58304 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.89□□□□□ -0.03
VSX2P58304 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
VSX2P58304 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
VSX2P58304 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.89□□□□□ -0.03
VSX2P58304 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VSX2P58304 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.89□□□□□ -0.03
VSX2P58304 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
VSX2P58304 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
VSX2P58304 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VSX2P58304 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.88□□□□□ -0.03
VSX2P58304 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.88□□□□□ -0.03
VSX2P58304 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
VSX2P58304 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
VSX2P58304 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
VSX2P58304 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VSX2P58304 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VSX2P58304 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VSX2P58304 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
VSX2P58304 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VSX2P58304 COX5BP8-201ENST00000416911 349 ntBASIC14.88□□□□□ -0.03
VSX2P58304 NME2P1-201ENST00000426182 414 ntBASIC14.88□□□□□ -0.03
VSX2P58304 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.88□□□□□ -0.03
VSX2P58304 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VSX2P58304 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.88□□□□□ -0.03
VSX2P58304 VDAC1P7-201ENST00000462417 847 ntBASIC14.88□□□□□ -0.03
VSX2P58304 AC011495.1-201ENST00000498085 584 ntBASIC14.88□□□□□ -0.03
VSX2P58304 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.88□□□□□ -0.03
VSX2P58304 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
VSX2P58304 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.88□□□□□ -0.03
VSX2P58304 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.88□□□□□ -0.03
VSX2P58304 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.88□□□□□ -0.03
VSX2P58304 BRI3BPP1-201ENST00000594224 787 ntBASIC14.88□□□□□ -0.03
VSX2P58304 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
VSX2P58304 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.88□□□□□ -0.03
VSX2P58304 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.88□□□□□ -0.03
VSX2P58304 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.88□□□□□ -0.03
VSX2P58304 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VSX2P58304 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VSX2P58304 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VSX2P58304 CU639417.3-201ENST00000624240 1404 ntBASIC14.88□□□□□ -0.03
VSX2P58304 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VSX2P58304 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.88□□□□□ -0.03
VSX2P58304 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VSX2P58304 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VSX2P58304 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VSX2P58304 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
VSX2P58304 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VSX2P58304 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.88□□□□□ -0.03
VSX2P58304 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms