Protein–RNA interactions for Protein: P57768

SNX16, Sorting nexin-16, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX16P57768 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
SNX16P57768 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNX16P57768 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNX16P57768 SPDYE19P-201ENST00000338590 713 ntBASIC16.4■□□□□ 0.22
SNX16P57768 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNX16P57768 TSPY16P-201ENST00000449843 468 ntBASIC16.4■□□□□ 0.22
SNX16P57768 AC104596.2-201ENST00000512793 793 ntBASIC16.4■□□□□ 0.22
SNX16P57768 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.4■□□□□ 0.22
SNX16P57768 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.4■□□□□ 0.22
SNX16P57768 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNX16P57768 AL158212.4-201ENST00000624062 1286 ntBASIC16.4■□□□□ 0.22
SNX16P57768 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.4■□□□□ 0.22
SNX16P57768 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
SNX16P57768 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNX16P57768 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.4■□□□□ 0.22
SNX16P57768 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNX16P57768 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
SNX16P57768 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNX16P57768 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNX16P57768 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNX16P57768 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SNX16P57768 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.4■□□□□ 0.22
SNX16P57768 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SNX16P57768 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.4■□□□□ 0.22
SNX16P57768 AC126177.1-201ENST00000547829 2218 ntBASIC16.39■□□□□ 0.22
SNX16P57768 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.22
SNX16P57768 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNX16P57768 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.39■□□□□ 0.21
SNX16P57768 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
SNX16P57768 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNX16P57768 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNX16P57768 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNX16P57768 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
SNX16P57768 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNX16P57768 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNX16P57768 AC087499.6-201ENST00000411576 835 ntBASIC16.39■□□□□ 0.21
SNX16P57768 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.39■□□□□ 0.21
SNX16P57768 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNX16P57768 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.39■□□□□ 0.21
SNX16P57768 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SNX16P57768 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.39■□□□□ 0.21
SNX16P57768 AC055876.2-201ENST00000531834 546 ntBASIC16.39■□□□□ 0.21
SNX16P57768 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.39■□□□□ 0.21
SNX16P57768 AC025181.2-201ENST00000606994 802 ntBASIC16.39■□□□□ 0.21
SNX16P57768 AC004233.3-201ENST00000607794 1269 ntBASIC16.39■□□□□ 0.21
SNX16P57768 AC099568.2-201ENST00000609194 695 ntBASIC16.39■□□□□ 0.21
SNX16P57768 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.39■□□□□ 0.21
SNX16P57768 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SNX16P57768 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNX16P57768 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNX16P57768 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SNX16P57768 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNX16P57768 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SNX16P57768 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SNX16P57768 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNX16P57768 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SNX16P57768 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNX16P57768 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.39■□□□□ 0.21
SNX16P57768 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SNX16P57768 AC009090.5-201ENST00000624886 2285 ntBASIC16.39■□□□□ 0.21
SNX16P57768 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNX16P57768 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.39■□□□□ 0.21
SNX16P57768 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNX16P57768 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.39■□□□□ 0.21
SNX16P57768 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.39■□□□□ 0.21
SNX16P57768 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SNX16P57768 AC092384.3-202ENST00000564646 2873 ntBASIC16.39■□□□□ 0.21
SNX16P57768 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
SNX16P57768 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SNX16P57768 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SNX16P57768 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNX16P57768 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.39■□□□□ 0.21
SNX16P57768 C18orf15-201ENST00000623680 2534 ntBASIC16.39■□□□□ 0.21
SNX16P57768 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNX16P57768 KRT8P44-201ENST00000441609 1350 ntBASIC16.38■□□□□ 0.21
SNX16P57768 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNX16P57768 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SNX16P57768 AC112693.3-201ENST00000624819 1983 ntBASIC16.38■□□□□ 0.21
SNX16P57768 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SNX16P57768 AC046158.3-201ENST00000624947 2558 ntBASIC16.38■□□□□ 0.21
SNX16P57768 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNX16P57768 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SNX16P57768 AL139384.1-201ENST00000612143 3047 ntBASIC16.38■□□□□ 0.21
SNX16P57768 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
SNX16P57768 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNX16P57768 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SNX16P57768 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNX16P57768 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.38■□□□□ 0.21
SNX16P57768 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SNX16P57768 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNX16P57768 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.38■□□□□ 0.21
SNX16P57768 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SNX16P57768 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNX16P57768 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SNX16P57768 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SNX16P57768 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SNX16P57768 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SNX16P57768 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.38■□□□□ 0.21
SNX16P57768 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNX16P57768 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms