Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 NME2P1-201ENST00000426182 414 ntBASIC16.53■□□□□ 0.24
CDH8P55286 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.53■□□□□ 0.24
CDH8P55286 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.53■□□□□ 0.24
CDH8P55286 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH8P55286 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.53■□□□□ 0.24
CDH8P55286 RPL13AP25-201ENST00000484130 612 ntBASIC16.53■□□□□ 0.24
CDH8P55286 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.53■□□□□ 0.24
CDH8P55286 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.53■□□□□ 0.24
CDH8P55286 AC005225.4-201ENST00000557330 545 ntBASIC16.53■□□□□ 0.24
CDH8P55286 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC16.53■□□□□ 0.24
CDH8P55286 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.53■□□□□ 0.24
CDH8P55286 AC012645.4-201ENST00000610691 1061 ntBASIC16.53■□□□□ 0.24
CDH8P55286 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CDH8P55286 AC144831.1-201ENST00000573312 2656 ntBASIC16.53■□□□□ 0.24
CDH8P55286 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH8P55286 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
CDH8P55286 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH8P55286 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH8P55286 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.53■□□□□ 0.24
CDH8P55286 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH8P55286 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDH8P55286 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH8P55286 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.53■□□□□ 0.24
CDH8P55286 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH8P55286 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.53■□□□□ 0.24
CDH8P55286 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH8P55286 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDH8P55286 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH8P55286 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.53■□□□□ 0.24
CDH8P55286 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH8P55286 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDH8P55286 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.53■□□□□ 0.24
CDH8P55286 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDH8P55286 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDH8P55286 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CDH8P55286 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.52■□□□□ 0.24
CDH8P55286 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDH8P55286 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.52■□□□□ 0.24
CDH8P55286 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CDH8P55286 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CDH8P55286 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDH8P55286 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CDH8P55286 AC098614.1-201ENST00000368528 745 ntBASIC16.52■□□□□ 0.24
CDH8P55286 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CDH8P55286 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDH8P55286 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.52■□□□□ 0.24
CDH8P55286 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDH8P55286 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC16.52■□□□□ 0.24
CDH8P55286 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.52■□□□□ 0.24
CDH8P55286 RPL5P21-201ENST00000404620 815 ntBASIC16.52■□□□□ 0.24
CDH8P55286 COX5BP8-201ENST00000416911 349 ntBASIC16.52■□□□□ 0.24
CDH8P55286 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.52■□□□□ 0.24
CDH8P55286 INE1-201ENST00000456273 945 ntBASIC16.52■□□□□ 0.24
CDH8P55286 RN7SL837P-201ENST00000463010 287 ntBASIC16.52■□□□□ 0.24
CDH8P55286 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.52■□□□□ 0.24
CDH8P55286 AC132938.2-201ENST00000579188 680 ntBASIC16.52■□□□□ 0.24
CDH8P55286 AL035252.4-201ENST00000624174 288 ntBASIC16.52■□□□□ 0.24
CDH8P55286 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.52■□□□□ 0.24
CDH8P55286 AL591163.1-201ENST00000641757 987 ntBASIC16.52■□□□□ 0.24
CDH8P55286 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CDH8P55286 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CDH8P55286 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CDH8P55286 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDH8P55286 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
CDH8P55286 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDH8P55286 AL359258.3-201ENST00000622910 2331 ntBASIC16.52■□□□□ 0.23
CDH8P55286 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
CDH8P55286 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
CDH8P55286 KRT8P22-201ENST00000562317 1415 ntBASIC16.52■□□□□ 0.23
CDH8P55286 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDH8P55286 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDH8P55286 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDH8P55286 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CDH8P55286 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
CDH8P55286 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.52■□□□□ 0.23
CDH8P55286 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDH8P55286 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDH8P55286 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CDH8P55286 KRT8P44-201ENST00000441609 1350 ntBASIC16.51■□□□□ 0.23
CDH8P55286 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.51■□□□□ 0.23
CDH8P55286 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.51■□□□□ 0.23
CDH8P55286 FER1L4-210ENST00000615531 5998 ntBASIC16.51■□□□□ 0.23
CDH8P55286 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDH8P55286 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH8P55286 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH8P55286 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.51■□□□□ 0.23
CDH8P55286 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH8P55286 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.51■□□□□ 0.23
CDH8P55286 AC063926.2-201ENST00000623766 1308 ntBASIC16.51■□□□□ 0.23
CDH8P55286 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CDH8P55286 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDH8P55286 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.51■□□□□ 0.23
CDH8P55286 AC022532.1-201ENST00000624563 1728 ntBASIC16.51■□□□□ 0.23
CDH8P55286 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDH8P55286 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CDH8P55286 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDH8P55286 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH8P55286 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH8P55286 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.51■□□□□ 0.23
CDH8P55286 AL138799.1-201ENST00000448213 1675 ntBASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms