Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.93■□□□□ 0.3
NCKAP1LP55160 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NCKAP1LP55160 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.92■□□□□ 0.3
NCKAP1LP55160 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.92■□□□□ 0.3
NCKAP1LP55160 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NCKAP1LP55160 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
NCKAP1LP55160 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NCKAP1LP55160 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.92■□□□□ 0.3
NCKAP1LP55160 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NCKAP1LP55160 REXO1L4P-201ENST00000605109 1937 ntBASIC16.92■□□□□ 0.3
NCKAP1LP55160 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NCKAP1LP55160 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NCKAP1LP55160 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NCKAP1LP55160 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NCKAP1LP55160 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NCKAP1LP55160 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.92■□□□□ 0.3
NCKAP1LP55160 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.92■□□□□ 0.3
NCKAP1LP55160 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NCKAP1LP55160 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.92■□□□□ 0.3
NCKAP1LP55160 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NCKAP1LP55160 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
NCKAP1LP55160 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
NCKAP1LP55160 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NCKAP1LP55160 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.92■□□□□ 0.3
NCKAP1LP55160 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC16.92■□□□□ 0.3
NCKAP1LP55160 INE1-201ENST00000456273 945 ntBASIC16.92■□□□□ 0.3
NCKAP1LP55160 AC011495.1-201ENST00000498085 584 ntBASIC16.92■□□□□ 0.3
NCKAP1LP55160 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC16.92■□□□□ 0.3
NCKAP1LP55160 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.92■□□□□ 0.3
NCKAP1LP55160 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.92■□□□□ 0.3
NCKAP1LP55160 AC012645.4-201ENST00000610691 1061 ntBASIC16.92■□□□□ 0.3
NCKAP1LP55160 BX539320.1-201ENST00000623759 877 ntBASIC16.92■□□□□ 0.3
NCKAP1LP55160 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NCKAP1LP55160 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.92■□□□□ 0.3
NCKAP1LP55160 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NCKAP1LP55160 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NCKAP1LP55160 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NCKAP1LP55160 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NCKAP1LP55160 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NCKAP1LP55160 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.92■□□□□ 0.3
NCKAP1LP55160 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NCKAP1LP55160 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
NCKAP1LP55160 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NCKAP1LP55160 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.91■□□□□ 0.3
NCKAP1LP55160 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.91■□□□□ 0.3
NCKAP1LP55160 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
NCKAP1LP55160 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.91■□□□□ 0.3
NCKAP1LP55160 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NCKAP1LP55160 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
NCKAP1LP55160 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NCKAP1LP55160 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NCKAP1LP55160 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NCKAP1LP55160 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.91■□□□□ 0.3
NCKAP1LP55160 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
NCKAP1LP55160 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NCKAP1LP55160 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.91■□□□□ 0.3
NCKAP1LP55160 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NCKAP1LP55160 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
NCKAP1LP55160 AL645937.2-201ENST00000396808 931 ntBASIC16.91■□□□□ 0.3
NCKAP1LP55160 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.91■□□□□ 0.3
NCKAP1LP55160 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NCKAP1LP55160 AP001582.1-201ENST00000525856 295 ntBASIC16.91■□□□□ 0.3
NCKAP1LP55160 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
NCKAP1LP55160 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
NCKAP1LP55160 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
NCKAP1LP55160 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
NCKAP1LP55160 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.91■□□□□ 0.3
NCKAP1LP55160 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC16.91■□□□□ 0.3
NCKAP1LP55160 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.91■□□□□ 0.3
NCKAP1LP55160 PRSS30P-206ENST00000641773 873 ntBASIC16.91■□□□□ 0.3
NCKAP1LP55160 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
NCKAP1LP55160 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.91■□□□□ 0.3
NCKAP1LP55160 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC16.91■□□□□ 0.3
NCKAP1LP55160 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NCKAP1LP55160 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.91■□□□□ 0.3
NCKAP1LP55160 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NCKAP1LP55160 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.91■□□□□ 0.3
NCKAP1LP55160 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.91■□□□□ 0.3
NCKAP1LP55160 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
NCKAP1LP55160 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NCKAP1LP55160 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
NCKAP1LP55160 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NCKAP1LP55160 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NCKAP1LP55160 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NCKAP1LP55160 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NCKAP1LP55160 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NCKAP1LP55160 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NCKAP1LP55160 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NCKAP1LP55160 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NCKAP1LP55160 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
NCKAP1LP55160 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NCKAP1LP55160 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
NCKAP1LP55160 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NCKAP1LP55160 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.9■□□□□ 0.3
NCKAP1LP55160 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NCKAP1LP55160 AL158070.2-201ENST00000623713 1621 ntBASIC16.9■□□□□ 0.3
NCKAP1LP55160 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
NCKAP1LP55160 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NCKAP1LP55160 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NCKAP1LP55160 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms