Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AL139010.1-201ENST00000454878 894 ntBASIC16.66■□□□□ 0.26
VCPP55072 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.66■□□□□ 0.26
VCPP55072 RNA5SP412-201ENST00000516234 123 ntBASIC16.66■□□□□ 0.26
VCPP55072 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC16.66■□□□□ 0.26
VCPP55072 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.66■□□□□ 0.26
VCPP55072 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.66■□□□□ 0.26
VCPP55072 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
VCPP55072 AC233724.13-201ENST00000598383 410 ntBASIC16.66■□□□□ 0.26
VCPP55072 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
VCPP55072 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.66■□□□□ 0.26
VCPP55072 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.66■□□□□ 0.26
VCPP55072 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
VCPP55072 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.66■□□□□ 0.26
VCPP55072 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
VCPP55072 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
VCPP55072 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VCPP55072 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VCPP55072 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.66■□□□□ 0.26
VCPP55072 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VCPP55072 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
VCPP55072 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.66■□□□□ 0.26
VCPP55072 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VCPP55072 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VCPP55072 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.65■□□□□ 0.26
VCPP55072 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VCPP55072 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
VCPP55072 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VCPP55072 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VCPP55072 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
VCPP55072 DBET-201ENST00000630918 3363 ntBASIC16.65■□□□□ 0.26
VCPP55072 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VCPP55072 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VCPP55072 CICP13-201ENST00000422015 2789 ntBASIC16.65■□□□□ 0.26
VCPP55072 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
VCPP55072 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
VCPP55072 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VCPP55072 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VCPP55072 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
VCPP55072 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.65■□□□□ 0.26
VCPP55072 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.65■□□□□ 0.26
VCPP55072 LBX2-201ENST00000341396 886 ntTSL 3 BASIC16.65■□□□□ 0.26
VCPP55072 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VCPP55072 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC16.65■□□□□ 0.26
VCPP55072 AC007551.1-201ENST00000457394 519 ntBASIC16.65■□□□□ 0.26
VCPP55072 SERBP1P3-201ENST00000459980 809 ntBASIC16.65■□□□□ 0.26
VCPP55072 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.65■□□□□ 0.26
VCPP55072 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
VCPP55072 FOS-206ENST00000555347 1280 ntTSL 2 BASIC16.65■□□□□ 0.26
VCPP55072 COG4-212ENST00000564653 590 ntTSL 5 BASIC16.65■□□□□ 0.26
VCPP55072 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.65■□□□□ 0.26
VCPP55072 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
VCPP55072 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
VCPP55072 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VCPP55072 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VCPP55072 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
VCPP55072 AC134407.2-201ENST00000625089 1978 ntBASIC16.65■□□□□ 0.26
VCPP55072 AC136621.1-201ENST00000624017 2304 ntBASIC16.65■□□□□ 0.26
VCPP55072 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VCPP55072 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
VCPP55072 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
VCPP55072 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
VCPP55072 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
VCPP55072 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
VCPP55072 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VCPP55072 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.65■□□□□ 0.26
VCPP55072 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VCPP55072 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VCPP55072 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
VCPP55072 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
VCPP55072 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC16.64■□□□□ 0.26
VCPP55072 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VCPP55072 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
VCPP55072 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VCPP55072 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VCPP55072 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VCPP55072 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VCPP55072 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.64■□□□□ 0.25
VCPP55072 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VCPP55072 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VCPP55072 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
VCPP55072 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC16.64■□□□□ 0.25
VCPP55072 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC16.64■□□□□ 0.25
VCPP55072 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC16.64■□□□□ 0.25
VCPP55072 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.64■□□□□ 0.25
VCPP55072 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC16.64■□□□□ 0.25
VCPP55072 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.64■□□□□ 0.25
VCPP55072 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC16.64■□□□□ 0.25
VCPP55072 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
VCPP55072 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC16.64■□□□□ 0.25
VCPP55072 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC16.64■□□□□ 0.25
VCPP55072 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.64■□□□□ 0.25
VCPP55072 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.64■□□□□ 0.25
VCPP55072 AL033527.5-202ENST00000641632 1098 ntBASIC16.64■□□□□ 0.25
VCPP55072 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
VCPP55072 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VCPP55072 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VCPP55072 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.64■□□□□ 0.25
VCPP55072 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
VCPP55072 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
VCPP55072 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms