Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC18.89■□□□□ 0.61
NUP98P52948 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC18.89■□□□□ 0.61
NUP98P52948 RN7SL190P-201ENST00000582519 257 ntBASIC18.89■□□□□ 0.61
NUP98P52948 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC18.89■□□□□ 0.61
NUP98P52948 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
NUP98P52948 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NUP98P52948 E2F3P2-201ENST00000447755 1422 ntBASIC18.89■□□□□ 0.61
NUP98P52948 AC012508.2-201ENST00000567613 1472 ntBASIC18.89■□□□□ 0.61
NUP98P52948 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
NUP98P52948 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
NUP98P52948 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NUP98P52948 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NUP98P52948 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC18.89■□□□□ 0.61
NUP98P52948 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NUP98P52948 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
NUP98P52948 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NUP98P52948 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NUP98P52948 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NUP98P52948 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NUP98P52948 TMEM198B-204ENST00000484016 896 ntBASIC18.88■□□□□ 0.61
NUP98P52948 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NUP98P52948 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC18.88■□□□□ 0.61
NUP98P52948 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC18.88■□□□□ 0.61
NUP98P52948 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC18.88■□□□□ 0.61
NUP98P52948 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NUP98P52948 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
NUP98P52948 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC18.88■□□□□ 0.61
NUP98P52948 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
NUP98P52948 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NUP98P52948 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
NUP98P52948 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NUP98P52948 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NUP98P52948 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NUP98P52948 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NUP98P52948 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
NUP98P52948 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
NUP98P52948 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NUP98P52948 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC18.88■□□□□ 0.61
NUP98P52948 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NUP98P52948 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
NUP98P52948 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NUP98P52948 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NUP98P52948 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NUP98P52948 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
NUP98P52948 AL360270.3-201ENST00000609118 1348 ntBASIC18.88■□□□□ 0.61
NUP98P52948 UFM1-202ENST00000379649 846 ntTSL 4 BASIC18.88■□□□□ 0.61
NUP98P52948 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
NUP98P52948 GGCT-203ENST00000409144 836 ntTSL 2 BASIC18.88■□□□□ 0.61
NUP98P52948 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC18.88■□□□□ 0.61
NUP98P52948 VDAC1P1-201ENST00000439229 848 ntBASIC18.88■□□□□ 0.61
NUP98P52948 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NUP98P52948 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NUP98P52948 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC18.88■□□□□ 0.61
NUP98P52948 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NUP98P52948 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC18.88■□□□□ 0.61
NUP98P52948 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
NUP98P52948 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
NUP98P52948 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
NUP98P52948 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC18.88■□□□□ 0.61
NUP98P52948 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
NUP98P52948 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NUP98P52948 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
NUP98P52948 AC006058.4-201ENST00000624016 1670 ntBASIC18.87■□□□□ 0.61
NUP98P52948 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC18.87■□□□□ 0.61
NUP98P52948 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NUP98P52948 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NUP98P52948 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NUP98P52948 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
NUP98P52948 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NUP98P52948 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
NUP98P52948 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NUP98P52948 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NUP98P52948 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
NUP98P52948 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NUP98P52948 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
NUP98P52948 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC18.87■□□□□ 0.61
NUP98P52948 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NUP98P52948 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC18.87■□□□□ 0.61
NUP98P52948 TLE1P1-201ENST00000422965 589 ntBASIC18.87■□□□□ 0.61
NUP98P52948 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC18.87■□□□□ 0.61
NUP98P52948 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NUP98P52948 CDC23-208ENST00000505120 455 ntTSL 3 BASIC18.87■□□□□ 0.61
NUP98P52948 AC026434.2-201ENST00000506094 1078 ntBASIC18.87■□□□□ 0.61
NUP98P52948 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NUP98P52948 AC005740.2-201ENST00000511085 419 ntBASIC18.87■□□□□ 0.61
NUP98P52948 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC18.87■□□□□ 0.61
NUP98P52948 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NUP98P52948 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NUP98P52948 AL162426.1-201ENST00000624141 743 ntBASIC18.87■□□□□ 0.61
NUP98P52948 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
NUP98P52948 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC18.87■□□□□ 0.61
NUP98P52948 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NUP98P52948 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NUP98P52948 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NUP98P52948 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NUP98P52948 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
NUP98P52948 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC18.86■□□□□ 0.61
NUP98P52948 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NUP98P52948 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC18.86■□□□□ 0.61
NUP98P52948 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms