Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
HMGA2P52926 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
HMGA2P52926 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.15□□□□□ -0.14
HMGA2P52926 AC015802.1-201ENST00000588104 1449 ntBASIC14.15□□□□□ -0.14
HMGA2P52926 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.15□□□□□ -0.14
HMGA2P52926 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HMGA2P52926 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HMGA2P52926 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HMGA2P52926 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
HMGA2P52926 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.15□□□□□ -0.14
HMGA2P52926 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HMGA2P52926 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
HMGA2P52926 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
HMGA2P52926 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
HMGA2P52926 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HMGA2P52926 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HMGA2P52926 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HMGA2P52926 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HMGA2P52926 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
HMGA2P52926 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HMGA2P52926 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.15□□□□□ -0.14
HMGA2P52926 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
HMGA2P52926 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.15□□□□□ -0.14
HMGA2P52926 AP001267.2-201ENST00000532619 2086 ntBASIC14.15□□□□□ -0.14
HMGA2P52926 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HMGA2P52926 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.15□□□□□ -0.14
HMGA2P52926 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HMGA2P52926 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HMGA2P52926 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HMGA2P52926 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
HMGA2P52926 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HMGA2P52926 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HMGA2P52926 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.15□□□□□ -0.14
HMGA2P52926 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
HMGA2P52926 NMU-202ENST00000505262 693 ntTSL 3 BASIC14.15□□□□□ -0.14
HMGA2P52926 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC14.15□□□□□ -0.14
HMGA2P52926 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
HMGA2P52926 AC040169.1-201ENST00000565382 521 ntBASIC14.15□□□□□ -0.14
HMGA2P52926 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.15□□□□□ -0.14
HMGA2P52926 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.15□□□□□ -0.14
HMGA2P52926 AC025181.2-201ENST00000606994 802 ntBASIC14.15□□□□□ -0.14
HMGA2P52926 AC007967.4-201ENST00000614700 386 ntBASIC14.15□□□□□ -0.14
HMGA2P52926 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HMGA2P52926 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
HMGA2P52926 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HMGA2P52926 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HMGA2P52926 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HMGA2P52926 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HMGA2P52926 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.15□□□□□ -0.14
HMGA2P52926 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
HMGA2P52926 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HMGA2P52926 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.15□□□□□ -0.14
HMGA2P52926 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
HMGA2P52926 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.15□□□□□ -0.14
HMGA2P52926 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HMGA2P52926 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
HMGA2P52926 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HMGA2P52926 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
HMGA2P52926 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HMGA2P52926 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HMGA2P52926 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
HMGA2P52926 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HMGA2P52926 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HMGA2P52926 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HMGA2P52926 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
HMGA2P52926 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HMGA2P52926 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HMGA2P52926 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.14□□□□□ -0.15
HMGA2P52926 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HMGA2P52926 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HMGA2P52926 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HMGA2P52926 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HMGA2P52926 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HMGA2P52926 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HMGA2P52926 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HMGA2P52926 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.14□□□□□ -0.15
HMGA2P52926 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
HMGA2P52926 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC14.14□□□□□ -0.15
HMGA2P52926 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.14□□□□□ -0.15
HMGA2P52926 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
HMGA2P52926 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.14□□□□□ -0.15
HMGA2P52926 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC14.14□□□□□ -0.15
HMGA2P52926 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.14□□□□□ -0.15
HMGA2P52926 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
HMGA2P52926 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC14.14□□□□□ -0.15
HMGA2P52926 AC105339.1-204ENST00000636249 355 ntBASIC14.14□□□□□ -0.15
HMGA2P52926 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
HMGA2P52926 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HMGA2P52926 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.14□□□□□ -0.15
HMGA2P52926 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HMGA2P52926 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
HMGA2P52926 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HMGA2P52926 CICP4-201ENST00000447359 2812 ntBASIC14.14□□□□□ -0.15
HMGA2P52926 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HMGA2P52926 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HMGA2P52926 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
HMGA2P52926 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
HMGA2P52926 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.14□□□□□ -0.15
HMGA2P52926 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMGA2P52926 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms