Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
GPC3P51654 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GPC3P51654 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC17.1■□□□□ 0.33
GPC3P51654 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GPC3P51654 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC17.1■□□□□ 0.33
GPC3P51654 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.1■□□□□ 0.33
GPC3P51654 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
GPC3P51654 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GPC3P51654 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC17.1■□□□□ 0.33
GPC3P51654 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GPC3P51654 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
GPC3P51654 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GPC3P51654 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GPC3P51654 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GPC3P51654 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GPC3P51654 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GPC3P51654 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GPC3P51654 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GPC3P51654 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
GPC3P51654 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GPC3P51654 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC17.09■□□□□ 0.33
GPC3P51654 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.09■□□□□ 0.33
GPC3P51654 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC17.09■□□□□ 0.33
GPC3P51654 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GPC3P51654 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GPC3P51654 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GPC3P51654 ACKR1-201ENST00000368121 1240 ntBASIC17.09■□□□□ 0.33
GPC3P51654 CTBP2P5-201ENST00000454986 1264 ntBASIC17.09■□□□□ 0.33
GPC3P51654 AC022137.2-201ENST00000503482 481 ntBASIC17.09■□□□□ 0.33
GPC3P51654 AC106760.1-201ENST00000508690 800 ntBASIC17.09■□□□□ 0.33
GPC3P51654 AP001582.1-201ENST00000525856 295 ntBASIC17.09■□□□□ 0.33
GPC3P51654 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC17.09■□□□□ 0.33
GPC3P51654 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GPC3P51654 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GPC3P51654 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC17.09■□□□□ 0.33
GPC3P51654 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GPC3P51654 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC17.09■□□□□ 0.33
GPC3P51654 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GPC3P51654 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC17.09■□□□□ 0.33
GPC3P51654 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
GPC3P51654 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GPC3P51654 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.09■□□□□ 0.33
GPC3P51654 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GPC3P51654 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GPC3P51654 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
GPC3P51654 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.09■□□□□ 0.33
GPC3P51654 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
GPC3P51654 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GPC3P51654 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GPC3P51654 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
GPC3P51654 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.08■□□□□ 0.33
GPC3P51654 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
GPC3P51654 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
GPC3P51654 AC090616.6-203ENST00000579186 1945 ntBASIC17.08■□□□□ 0.33
GPC3P51654 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.08■□□□□ 0.33
GPC3P51654 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
GPC3P51654 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
GPC3P51654 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GPC3P51654 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC17.08■□□□□ 0.32
GPC3P51654 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
GPC3P51654 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
GPC3P51654 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
GPC3P51654 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GPC3P51654 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC17.08■□□□□ 0.32
GPC3P51654 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC17.08■□□□□ 0.32
GPC3P51654 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC17.08■□□□□ 0.32
GPC3P51654 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC17.08■□□□□ 0.32
GPC3P51654 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC17.08■□□□□ 0.32
GPC3P51654 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC17.08■□□□□ 0.32
GPC3P51654 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC17.08■□□□□ 0.32
GPC3P51654 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC17.08■□□□□ 0.32
GPC3P51654 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
GPC3P51654 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC17.08■□□□□ 0.32
GPC3P51654 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
GPC3P51654 NFIC-211ENST00000641145 8399 ntBASIC17.08■□□□□ 0.32
GPC3P51654 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
GPC3P51654 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
GPC3P51654 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
GPC3P51654 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
GPC3P51654 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC17.08■□□□□ 0.32
GPC3P51654 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
GPC3P51654 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
GPC3P51654 AC022532.1-201ENST00000624563 1728 ntBASIC17.07■□□□□ 0.32
GPC3P51654 AL138799.1-201ENST00000448213 1675 ntBASIC17.07■□□□□ 0.32
GPC3P51654 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
GPC3P51654 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GPC3P51654 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC17.07■□□□□ 0.32
GPC3P51654 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC17.07■□□□□ 0.32
GPC3P51654 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GPC3P51654 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GPC3P51654 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GPC3P51654 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC17.07■□□□□ 0.32
GPC3P51654 SSR4P1-203ENST00000599569 2260 ntBASIC17.07■□□□□ 0.32
GPC3P51654 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GPC3P51654 AC093525.8-201ENST00000624099 1342 ntBASIC17.07■□□□□ 0.32
GPC3P51654 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
GPC3P51654 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
GPC3P51654 USB1-202ENST00000423271 1217 ntTSL 2 BASIC17.07■□□□□ 0.32
GPC3P51654 KLF2P4-201ENST00000451959 1225 ntBASIC17.07■□□□□ 0.32
GPC3P51654 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms