Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC12.35□□□□□ -0.43
CDC34P49427 MPI-203ENST00000535694 1523 ntTSL 2 BASIC12.35□□□□□ -0.43
CDC34P49427 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
CDC34P49427 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CDC34P49427 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CDC34P49427 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
CDC34P49427 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC12.35□□□□□ -0.43
CDC34P49427 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC12.35□□□□□ -0.43
CDC34P49427 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CDC34P49427 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CDC34P49427 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CDC34P49427 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
CDC34P49427 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CDC34P49427 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC12.35□□□□□ -0.43
CDC34P49427 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
CDC34P49427 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC12.34□□□□□ -0.43
CDC34P49427 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CDC34P49427 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
CDC34P49427 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CDC34P49427 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CDC34P49427 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
CDC34P49427 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CDC34P49427 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC12.34□□□□□ -0.43
CDC34P49427 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC12.34□□□□□ -0.43
CDC34P49427 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CDC34P49427 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CDC34P49427 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC12.34□□□□□ -0.43
CDC34P49427 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
CDC34P49427 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CDC34P49427 AL139385.1-201ENST00000611744 3272 ntBASIC12.34□□□□□ -0.43
CDC34P49427 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
CDC34P49427 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC12.34□□□□□ -0.43
CDC34P49427 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CDC34P49427 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CDC34P49427 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CDC34P49427 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
CDC34P49427 KRT18P27-201ENST00000427733 1299 ntBASIC12.34□□□□□ -0.43
CDC34P49427 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CDC34P49427 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC12.34□□□□□ -0.43
CDC34P49427 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC12.34□□□□□ -0.43
CDC34P49427 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC12.34□□□□□ -0.43
CDC34P49427 CIPC-205ENST00000555437 566 ntTSL 3 BASIC12.34□□□□□ -0.43
CDC34P49427 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CDC34P49427 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CDC34P49427 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC12.34□□□□□ -0.43
CDC34P49427 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
CDC34P49427 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CDC34P49427 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CDC34P49427 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CDC34P49427 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CDC34P49427 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC12.34□□□□□ -0.43
CDC34P49427 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CDC34P49427 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CDC34P49427 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC12.34□□□□□ -0.43
CDC34P49427 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CDC34P49427 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CDC34P49427 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC12.34□□□□□ -0.43
CDC34P49427 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CDC34P49427 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CDC34P49427 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
CDC34P49427 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
CDC34P49427 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC12.34□□□□□ -0.43
CDC34P49427 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC12.34□□□□□ -0.43
CDC34P49427 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
CDC34P49427 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC12.34□□□□□ -0.43
CDC34P49427 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CDC34P49427 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
CDC34P49427 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
CDC34P49427 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
CDC34P49427 AC136759.1-202ENST00000530858 2194 ntBASIC12.33□□□□□ -0.44
CDC34P49427 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC12.33□□□□□ -0.44
CDC34P49427 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
CDC34P49427 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC12.33□□□□□ -0.44
CDC34P49427 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC12.33□□□□□ -0.44
CDC34P49427 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
CDC34P49427 HSPA7-201ENST00000445535 1927 ntBASIC12.33□□□□□ -0.44
CDC34P49427 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC12.33□□□□□ -0.44
CDC34P49427 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CDC34P49427 AC027601.5-201ENST00000624065 2482 ntBASIC12.33□□□□□ -0.44
CDC34P49427 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
CDC34P49427 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CDC34P49427 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
CDC34P49427 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CDC34P49427 AC010327.5-201ENST00000586923 3061 ntBASIC12.33□□□□□ -0.44
CDC34P49427 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
CDC34P49427 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CDC34P49427 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC12.33□□□□□ -0.44
CDC34P49427 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
CDC34P49427 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CDC34P49427 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CDC34P49427 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CDC34P49427 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CDC34P49427 AC073621.1-201ENST00000392730 636 ntBASIC12.33□□□□□ -0.44
CDC34P49427 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CDC34P49427 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC12.33□□□□□ -0.44
CDC34P49427 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
CDC34P49427 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CDC34P49427 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
CDC34P49427 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CDC34P49427 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms