Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CSNK1A1P48729 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CSNK1A1P48729 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CSNK1A1P48729 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CSNK1A1P48729 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CSNK1A1P48729 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.86□□□□□ -0.19
CSNK1A1P48729 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CSNK1A1P48729 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CSNK1A1P48729 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.86□□□□□ -0.19
CSNK1A1P48729 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.86□□□□□ -0.19
CSNK1A1P48729 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.86□□□□□ -0.19
CSNK1A1P48729 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.86□□□□□ -0.19
CSNK1A1P48729 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.86□□□□□ -0.19
CSNK1A1P48729 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CSNK1A1P48729 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CSNK1A1P48729 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CSNK1A1P48729 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.86□□□□□ -0.19
CSNK1A1P48729 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CSNK1A1P48729 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CSNK1A1P48729 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CSNK1A1P48729 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CSNK1A1P48729 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CSNK1A1P48729 AL133267.1-201ENST00000398220 340 ntBASIC13.86□□□□□ -0.19
CSNK1A1P48729 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC13.86□□□□□ -0.19
CSNK1A1P48729 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC13.86□□□□□ -0.19
CSNK1A1P48729 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC13.86□□□□□ -0.19
CSNK1A1P48729 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.86□□□□□ -0.19
CSNK1A1P48729 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CSNK1A1P48729 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.86□□□□□ -0.19
CSNK1A1P48729 KRT18P43-201ENST00000469825 1281 ntBASIC13.86□□□□□ -0.19
CSNK1A1P48729 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
CSNK1A1P48729 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.86□□□□□ -0.19
CSNK1A1P48729 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CSNK1A1P48729 AC135586.1-201ENST00000539323 574 ntBASIC13.86□□□□□ -0.19
CSNK1A1P48729 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CSNK1A1P48729 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.86□□□□□ -0.19
CSNK1A1P48729 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.86□□□□□ -0.19
CSNK1A1P48729 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC13.86□□□□□ -0.19
CSNK1A1P48729 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC13.86□□□□□ -0.19
CSNK1A1P48729 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.86□□□□□ -0.19
CSNK1A1P48729 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC13.86□□□□□ -0.19
CSNK1A1P48729 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CSNK1A1P48729 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CSNK1A1P48729 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.86□□□□□ -0.19
CSNK1A1P48729 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CSNK1A1P48729 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CSNK1A1P48729 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.86□□□□□ -0.19
CSNK1A1P48729 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CSNK1A1P48729 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CSNK1A1P48729 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CSNK1A1P48729 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC13.86□□□□□ -0.19
CSNK1A1P48729 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CSNK1A1P48729 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CSNK1A1P48729 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CSNK1A1P48729 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC13.85□□□□□ -0.19
CSNK1A1P48729 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CSNK1A1P48729 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CSNK1A1P48729 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
CSNK1A1P48729 AC112693.3-201ENST00000624819 1983 ntBASIC13.85□□□□□ -0.19
CSNK1A1P48729 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.85□□□□□ -0.19
CSNK1A1P48729 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CSNK1A1P48729 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CSNK1A1P48729 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CSNK1A1P48729 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CSNK1A1P48729 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CSNK1A1P48729 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CSNK1A1P48729 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.85□□□□□ -0.19
CSNK1A1P48729 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CSNK1A1P48729 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CSNK1A1P48729 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.85□□□□□ -0.19
CSNK1A1P48729 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CSNK1A1P48729 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CSNK1A1P48729 TOMM22P5-201ENST00000416399 439 ntBASIC13.85□□□□□ -0.19
CSNK1A1P48729 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC13.85□□□□□ -0.19
CSNK1A1P48729 RNA5SP421-201ENST00000516864 134 ntBASIC13.85□□□□□ -0.19
CSNK1A1P48729 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC13.85□□□□□ -0.19
CSNK1A1P48729 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.85□□□□□ -0.19
CSNK1A1P48729 AC009407.1-201ENST00000568958 598 ntBASIC13.85□□□□□ -0.19
CSNK1A1P48729 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.85□□□□□ -0.19
CSNK1A1P48729 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CSNK1A1P48729 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CSNK1A1P48729 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CSNK1A1P48729 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CSNK1A1P48729 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.85□□□□□ -0.19
CSNK1A1P48729 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CSNK1A1P48729 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CSNK1A1P48729 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CSNK1A1P48729 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CSNK1A1P48729 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CSNK1A1P48729 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.85□□□□□ -0.19
CSNK1A1P48729 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.85□□□□□ -0.19
CSNK1A1P48729 AC138035.3-201ENST00000622706 2791 ntBASIC13.85□□□□□ -0.19
CSNK1A1P48729 AC138969.3-201ENST00000546612 1459 ntBASIC13.85□□□□□ -0.19
CSNK1A1P48729 AC138932.2-201ENST00000548268 1459 ntBASIC13.85□□□□□ -0.19
CSNK1A1P48729 AC126755.4-201ENST00000549796 1459 ntBASIC13.85□□□□□ -0.19
CSNK1A1P48729 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CSNK1A1P48729 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CSNK1A1P48729 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.85□□□□□ -0.19
CSNK1A1P48729 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CSNK1A1P48729 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms