Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC12.86□□□□□ -0.35
SNCAP37840 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC12.86□□□□□ -0.35
SNCAP37840 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
SNCAP37840 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SNCAP37840 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SNCAP37840 PTENP1-202ENST00000532280 3996 ntBASIC12.86□□□□□ -0.35
SNCAP37840 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC12.86□□□□□ -0.35
SNCAP37840 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SNCAP37840 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC12.86□□□□□ -0.35
SNCAP37840 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SNCAP37840 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
SNCAP37840 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
SNCAP37840 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SNCAP37840 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SNCAP37840 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SNCAP37840 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SNCAP37840 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SNCAP37840 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SNCAP37840 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SNCAP37840 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SNCAP37840 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SNCAP37840 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SNCAP37840 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SNCAP37840 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC12.85□□□□□ -0.35
SNCAP37840 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC12.85□□□□□ -0.35
SNCAP37840 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SNCAP37840 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SNCAP37840 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SNCAP37840 NIN-202ENST00000324330 4364 ntTSL 5 BASIC12.85□□□□□ -0.35
SNCAP37840 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
SNCAP37840 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC12.85□□□□□ -0.35
SNCAP37840 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC12.85□□□□□ -0.35
SNCAP37840 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SNCAP37840 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SNCAP37840 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SNCAP37840 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC12.85□□□□□ -0.35
SNCAP37840 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC12.85□□□□□ -0.35
SNCAP37840 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SNCAP37840 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
SNCAP37840 AC073439.1-201ENST00000624121 1774 ntBASIC12.85□□□□□ -0.35
SNCAP37840 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
SNCAP37840 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC12.85□□□□□ -0.35
SNCAP37840 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
SNCAP37840 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC12.85□□□□□ -0.35
SNCAP37840 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
SNCAP37840 FALEC-201ENST00000416894 566 ntTSL 3 BASIC12.85□□□□□ -0.35
SNCAP37840 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC12.85□□□□□ -0.35
SNCAP37840 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
SNCAP37840 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC12.85□□□□□ -0.35
SNCAP37840 AC009947.1-201ENST00000444350 727 ntBASIC12.85□□□□□ -0.35
SNCAP37840 RN7SL510P-201ENST00000581311 263 ntBASIC12.85□□□□□ -0.35
SNCAP37840 MIR4321-201ENST00000592276 80 ntBASIC12.85□□□□□ -0.35
SNCAP37840 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
SNCAP37840 AL161645.1-201ENST00000622716 1255 ntBASIC12.85□□□□□ -0.35
SNCAP37840 AC116407.3-201ENST00000623905 1129 ntBASIC12.85□□□□□ -0.35
SNCAP37840 AC010507.1-201ENST00000633895 436 ntBASIC12.85□□□□□ -0.35
SNCAP37840 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
SNCAP37840 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
SNCAP37840 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SNCAP37840 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
SNCAP37840 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
SNCAP37840 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
SNCAP37840 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SNCAP37840 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SNCAP37840 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SNCAP37840 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC12.85□□□□□ -0.35
SNCAP37840 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC12.85□□□□□ -0.35
SNCAP37840 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
SNCAP37840 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SNCAP37840 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SNCAP37840 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SNCAP37840 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SNCAP37840 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC12.85□□□□□ -0.35
SNCAP37840 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SNCAP37840 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
SNCAP37840 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC12.84□□□□□ -0.35
SNCAP37840 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SNCAP37840 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
SNCAP37840 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SNCAP37840 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
SNCAP37840 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SNCAP37840 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
SNCAP37840 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SNCAP37840 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SNCAP37840 KRT8P44-201ENST00000441609 1350 ntBASIC12.84□□□□□ -0.35
SNCAP37840 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SNCAP37840 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SNCAP37840 AC126365.1-201ENST00000578585 1514 ntBASIC12.84□□□□□ -0.35
SNCAP37840 AL589702.1-201ENST00000641229 1509 ntBASIC12.84□□□□□ -0.35
SNCAP37840 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SNCAP37840 AL731571.1-201ENST00000617058 5428 ntBASIC12.84□□□□□ -0.35
SNCAP37840 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SNCAP37840 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SNCAP37840 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SNCAP37840 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SNCAP37840 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SNCAP37840 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SNCAP37840 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SNCAP37840 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SNCAP37840 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms