Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDE6BP35913 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
PDE6BP35913 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC18.9■□□□□ 0.62
PDE6BP35913 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDE6BP35913 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PDE6BP35913 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDE6BP35913 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDE6BP35913 AL157791.1-201ENST00000553667 1699 ntBASIC18.9■□□□□ 0.62
PDE6BP35913 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
PDE6BP35913 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PDE6BP35913 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDE6BP35913 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
PDE6BP35913 AC069218.1-201ENST00000435269 762 ntBASIC18.9■□□□□ 0.62
PDE6BP35913 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC18.9■□□□□ 0.62
PDE6BP35913 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC18.9■□□□□ 0.62
PDE6BP35913 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC18.9■□□□□ 0.62
PDE6BP35913 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PDE6BP35913 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDE6BP35913 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC18.9■□□□□ 0.62
PDE6BP35913 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC18.9■□□□□ 0.62
PDE6BP35913 AC068587.8-201ENST00000641239 219 ntBASIC18.9■□□□□ 0.62
PDE6BP35913 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PDE6BP35913 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDE6BP35913 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
PDE6BP35913 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.9■□□□□ 0.62
PDE6BP35913 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC18.9■□□□□ 0.62
PDE6BP35913 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
PDE6BP35913 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDE6BP35913 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PDE6BP35913 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PDE6BP35913 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
PDE6BP35913 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.89■□□□□ 0.62
PDE6BP35913 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC18.89■□□□□ 0.62
PDE6BP35913 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
PDE6BP35913 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDE6BP35913 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
PDE6BP35913 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PDE6BP35913 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDE6BP35913 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDE6BP35913 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC18.89■□□□□ 0.61
PDE6BP35913 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDE6BP35913 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDE6BP35913 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDE6BP35913 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC18.89■□□□□ 0.61
PDE6BP35913 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
PDE6BP35913 GHSR-202ENST00000427970 912 ntBASIC18.89■□□□□ 0.61
PDE6BP35913 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC18.89■□□□□ 0.61
PDE6BP35913 CFL1-214ENST00000534769 758 ntTSL 2 BASIC18.89■□□□□ 0.61
PDE6BP35913 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC18.89■□□□□ 0.61
PDE6BP35913 AC005324.6-201ENST00000587972 613 ntBASIC18.89■□□□□ 0.61
PDE6BP35913 AL353770.1-201ENST00000614915 403 ntBASIC18.89■□□□□ 0.61
PDE6BP35913 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC18.89■□□□□ 0.61
PDE6BP35913 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
PDE6BP35913 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC18.89■□□□□ 0.61
PDE6BP35913 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PDE6BP35913 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PDE6BP35913 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
PDE6BP35913 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDE6BP35913 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDE6BP35913 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDE6BP35913 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDE6BP35913 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PDE6BP35913 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDE6BP35913 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PDE6BP35913 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDE6BP35913 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDE6BP35913 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PDE6BP35913 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.88■□□□□ 0.61
PDE6BP35913 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDE6BP35913 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDE6BP35913 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PDE6BP35913 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDE6BP35913 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
PDE6BP35913 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDE6BP35913 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
PDE6BP35913 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
PDE6BP35913 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDE6BP35913 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
PDE6BP35913 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PDE6BP35913 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC18.88■□□□□ 0.61
PDE6BP35913 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PDE6BP35913 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC18.88■□□□□ 0.61
PDE6BP35913 CMC1-204ENST00000423894 549 ntTSL 2 BASIC18.88■□□□□ 0.61
PDE6BP35913 AL353637.1-201ENST00000451571 732 ntBASIC18.88■□□□□ 0.61
PDE6BP35913 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC18.88■□□□□ 0.61
PDE6BP35913 AC125604.1-201ENST00000496255 707 ntBASIC18.88■□□□□ 0.61
PDE6BP35913 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PDE6BP35913 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDE6BP35913 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC18.88■□□□□ 0.61
PDE6BP35913 IQSEC3P1-201ENST00000538799 536 ntBASIC18.88■□□□□ 0.61
PDE6BP35913 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC18.88■□□□□ 0.61
PDE6BP35913 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PDE6BP35913 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC18.88■□□□□ 0.61
PDE6BP35913 MIR3147-201ENST00000577811 66 ntBASIC18.88■□□□□ 0.61
PDE6BP35913 AL162426.1-201ENST00000624141 743 ntBASIC18.88■□□□□ 0.61
PDE6BP35913 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDE6BP35913 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC18.88■□□□□ 0.61
PDE6BP35913 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDE6BP35913 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
PDE6BP35913 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms