Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLCN1P35523 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLCN1P35523 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLCN1P35523 AC023024.2-201ENST00000623561 1993 ntBASIC17.73■□□□□ 0.43
CLCN1P35523 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CLCN1P35523 PCDHA3-202ENST00000532566 4594 ntBASIC17.73■□□□□ 0.43
CLCN1P35523 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLCN1P35523 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLCN1P35523 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CLCN1P35523 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLCN1P35523 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLCN1P35523 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLCN1P35523 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLCN1P35523 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLCN1P35523 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CLCN1P35523 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC17.73■□□□□ 0.43
CLCN1P35523 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLCN1P35523 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLCN1P35523 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
CLCN1P35523 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.73■□□□□ 0.43
CLCN1P35523 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CLCN1P35523 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.73■□□□□ 0.43
CLCN1P35523 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.73■□□□□ 0.43
CLCN1P35523 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.73■□□□□ 0.43
CLCN1P35523 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.73■□□□□ 0.43
CLCN1P35523 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.73■□□□□ 0.43
CLCN1P35523 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.73■□□□□ 0.43
CLCN1P35523 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLCN1P35523 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.73■□□□□ 0.43
CLCN1P35523 AC064836.3-201ENST00000607928 673 ntBASIC17.73■□□□□ 0.43
CLCN1P35523 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CLCN1P35523 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLCN1P35523 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLCN1P35523 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLCN1P35523 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC17.73■□□□□ 0.43
CLCN1P35523 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLCN1P35523 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLCN1P35523 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC17.73■□□□□ 0.43
CLCN1P35523 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.73■□□□□ 0.43
CLCN1P35523 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLCN1P35523 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC17.73■□□□□ 0.43
CLCN1P35523 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CLCN1P35523 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLCN1P35523 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLCN1P35523 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLCN1P35523 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLCN1P35523 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLCN1P35523 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLCN1P35523 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC17.72■□□□□ 0.43
CLCN1P35523 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC17.72■□□□□ 0.43
CLCN1P35523 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CLCN1P35523 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC17.72■□□□□ 0.43
CLCN1P35523 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLCN1P35523 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CLCN1P35523 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CLCN1P35523 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLCN1P35523 HADH-202ENST00000403312 1752 ntTSL 5 BASIC17.72■□□□□ 0.43
CLCN1P35523 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC17.72■□□□□ 0.43
CLCN1P35523 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLCN1P35523 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.72■□□□□ 0.43
CLCN1P35523 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLCN1P35523 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLCN1P35523 AL590627.1-203ENST00000421194 1026 ntBASIC17.72■□□□□ 0.43
CLCN1P35523 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.72■□□□□ 0.43
CLCN1P35523 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.72■□□□□ 0.43
CLCN1P35523 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
CLCN1P35523 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CLCN1P35523 AL031055.1-201ENST00000606362 631 ntBASIC17.72■□□□□ 0.43
CLCN1P35523 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC17.72■□□□□ 0.43
CLCN1P35523 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC17.72■□□□□ 0.43
CLCN1P35523 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLCN1P35523 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLCN1P35523 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLCN1P35523 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC17.72■□□□□ 0.43
CLCN1P35523 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLCN1P35523 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLCN1P35523 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLCN1P35523 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLCN1P35523 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLCN1P35523 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLCN1P35523 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CLCN1P35523 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLCN1P35523 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CLCN1P35523 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLCN1P35523 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CLCN1P35523 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC17.71■□□□□ 0.43
CLCN1P35523 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CLCN1P35523 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLCN1P35523 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.71■□□□□ 0.43
CLCN1P35523 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CLCN1P35523 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLCN1P35523 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC17.71■□□□□ 0.43
CLCN1P35523 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC17.71■□□□□ 0.43
CLCN1P35523 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLCN1P35523 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLCN1P35523 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLCN1P35523 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
CLCN1P35523 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLCN1P35523 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.71■□□□□ 0.43
CLCN1P35523 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms