Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 IQSEC3P1-201ENST00000538799 536 ntBASIC19.26■□□□□ 0.67
RFC4P35249 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC19.26■□□□□ 0.67
RFC4P35249 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC19.26■□□□□ 0.67
RFC4P35249 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
RFC4P35249 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
RFC4P35249 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RFC4P35249 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC19.26■□□□□ 0.67
RFC4P35249 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RFC4P35249 AL157791.1-201ENST00000553667 1699 ntBASIC19.26■□□□□ 0.67
RFC4P35249 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC19.26■□□□□ 0.67
RFC4P35249 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RFC4P35249 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
RFC4P35249 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RFC4P35249 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
RFC4P35249 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RFC4P35249 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
RFC4P35249 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RFC4P35249 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RFC4P35249 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RFC4P35249 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
RFC4P35249 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC19.25■□□□□ 0.67
RFC4P35249 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RFC4P35249 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
RFC4P35249 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
RFC4P35249 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RFC4P35249 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RFC4P35249 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RFC4P35249 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RFC4P35249 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC19.25■□□□□ 0.67
RFC4P35249 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RFC4P35249 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC19.25■□□□□ 0.67
RFC4P35249 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC19.25■□□□□ 0.67
RFC4P35249 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC19.25■□□□□ 0.67
RFC4P35249 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RFC4P35249 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC19.25■□□□□ 0.67
RFC4P35249 AC006335.1-201ENST00000445200 547 ntBASIC19.25■□□□□ 0.67
RFC4P35249 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC19.25■□□□□ 0.67
RFC4P35249 MESTP3-201ENST00000503460 968 ntBASIC19.25■□□□□ 0.67
RFC4P35249 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC19.25■□□□□ 0.67
RFC4P35249 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC19.25■□□□□ 0.67
RFC4P35249 AC004466.1-201ENST00000599515 1080 ntBASIC19.25■□□□□ 0.67
RFC4P35249 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC19.25■□□□□ 0.67
RFC4P35249 AP003419.4-201ENST00000616071 517 ntBASIC19.25■□□□□ 0.67
RFC4P35249 AC068587.8-201ENST00000641239 219 ntBASIC19.25■□□□□ 0.67
RFC4P35249 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RFC4P35249 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
RFC4P35249 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RFC4P35249 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RFC4P35249 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
RFC4P35249 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
RFC4P35249 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RFC4P35249 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC19.25■□□□□ 0.67
RFC4P35249 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RFC4P35249 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RFC4P35249 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RFC4P35249 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RFC4P35249 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RFC4P35249 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RFC4P35249 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
RFC4P35249 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RFC4P35249 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC19.24■□□□□ 0.67
RFC4P35249 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC19.24■□□□□ 0.67
RFC4P35249 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC19.24■□□□□ 0.67
RFC4P35249 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RFC4P35249 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RFC4P35249 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
RFC4P35249 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
RFC4P35249 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC19.24■□□□□ 0.67
RFC4P35249 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC19.24■□□□□ 0.67
RFC4P35249 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RFC4P35249 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC19.24■□□□□ 0.67
RFC4P35249 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RFC4P35249 AC125604.1-201ENST00000496255 707 ntBASIC19.24■□□□□ 0.67
RFC4P35249 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RFC4P35249 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC19.24■□□□□ 0.67
RFC4P35249 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RFC4P35249 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC19.24■□□□□ 0.67
RFC4P35249 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC19.24■□□□□ 0.67
RFC4P35249 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC19.24■□□□□ 0.67
RFC4P35249 AL353770.1-201ENST00000614915 403 ntBASIC19.24■□□□□ 0.67
RFC4P35249 AL136295.7-201ENST00000619226 1200 ntBASIC19.24■□□□□ 0.67
RFC4P35249 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC19.24■□□□□ 0.67
RFC4P35249 AL645728.2-202ENST00000641679 227 ntBASIC19.24■□□□□ 0.67
RFC4P35249 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RFC4P35249 AC069224.1-201ENST00000566372 1715 ntBASIC19.24■□□□□ 0.67
RFC4P35249 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RFC4P35249 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC19.24■□□□□ 0.67
RFC4P35249 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RFC4P35249 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RFC4P35249 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC19.24■□□□□ 0.67
RFC4P35249 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RFC4P35249 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RFC4P35249 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RFC4P35249 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RFC4P35249 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RFC4P35249 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC19.23■□□□□ 0.67
RFC4P35249 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RFC4P35249 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RFC4P35249 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RFC4P35249 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms