Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.3□□□□□ -0.12
SHC1P29353 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SHC1P29353 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
SHC1P29353 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHC1P29353 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.3□□□□□ -0.12
SHC1P29353 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHC1P29353 TCAF2P1-201ENST00000291129 2421 ntBASIC14.3□□□□□ -0.12
SHC1P29353 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
SHC1P29353 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SHC1P29353 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SHC1P29353 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.29□□□□□ -0.12
SHC1P29353 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
SHC1P29353 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SHC1P29353 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SHC1P29353 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SHC1P29353 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.29□□□□□ -0.12
SHC1P29353 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.29□□□□□ -0.12
SHC1P29353 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.29□□□□□ -0.12
SHC1P29353 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.29□□□□□ -0.12
SHC1P29353 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SHC1P29353 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
SHC1P29353 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SHC1P29353 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.29□□□□□ -0.12
SHC1P29353 MIR661-201ENST00000384842 89 ntBASIC14.29□□□□□ -0.12
SHC1P29353 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SHC1P29353 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.29□□□□□ -0.12
SHC1P29353 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.29□□□□□ -0.12
SHC1P29353 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.29□□□□□ -0.12
SHC1P29353 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.29□□□□□ -0.12
SHC1P29353 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.29□□□□□ -0.12
SHC1P29353 LINC01115-203ENST00000606068 577 ntBASIC14.29□□□□□ -0.12
SHC1P29353 AC004790.1-201ENST00000612686 536 ntBASIC14.29□□□□□ -0.12
SHC1P29353 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SHC1P29353 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SHC1P29353 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
SHC1P29353 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SHC1P29353 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SHC1P29353 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SHC1P29353 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.29□□□□□ -0.12
SHC1P29353 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SHC1P29353 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SHC1P29353 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SHC1P29353 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SHC1P29353 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SHC1P29353 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.29□□□□□ -0.12
SHC1P29353 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
SHC1P29353 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SHC1P29353 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SHC1P29353 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SHC1P29353 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
SHC1P29353 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
SHC1P29353 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SHC1P29353 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SHC1P29353 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SHC1P29353 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SHC1P29353 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SHC1P29353 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SHC1P29353 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.28□□□□□ -0.12
SHC1P29353 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SHC1P29353 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
SHC1P29353 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SHC1P29353 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SHC1P29353 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SHC1P29353 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SHC1P29353 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
SHC1P29353 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SHC1P29353 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.28□□□□□ -0.12
SHC1P29353 AC136604.1-201ENST00000418535 575 ntBASIC14.28□□□□□ -0.12
SHC1P29353 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SHC1P29353 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.28□□□□□ -0.12
SHC1P29353 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.28□□□□□ -0.12
SHC1P29353 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
SHC1P29353 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.28□□□□□ -0.12
SHC1P29353 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.28□□□□□ -0.12
SHC1P29353 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.28□□□□□ -0.12
SHC1P29353 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SHC1P29353 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.28□□□□□ -0.12
SHC1P29353 RNA5SP421-201ENST00000516864 134 ntBASIC14.28□□□□□ -0.12
SHC1P29353 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.28□□□□□ -0.12
SHC1P29353 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.28□□□□□ -0.12
SHC1P29353 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.28□□□□□ -0.12
SHC1P29353 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.28□□□□□ -0.12
SHC1P29353 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SHC1P29353 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.28□□□□□ -0.12
SHC1P29353 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.28□□□□□ -0.12
SHC1P29353 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
SHC1P29353 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.28□□□□□ -0.12
SHC1P29353 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.28□□□□□ -0.12
SHC1P29353 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SHC1P29353 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.28□□□□□ -0.12
SHC1P29353 AC011467.4-201ENST00000594891 528 ntBASIC14.28□□□□□ -0.12
SHC1P29353 AL096865.1-201ENST00000606796 927 ntBASIC14.28□□□□□ -0.12
SHC1P29353 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.28□□□□□ -0.12
SHC1P29353 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SHC1P29353 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
SHC1P29353 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SHC1P29353 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
SHC1P29353 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SHC1P29353 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
SHC1P29353 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms