Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
EPHA3P29320 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.16■□□□□ 0.02
EPHA3P29320 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
EPHA3P29320 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
EPHA3P29320 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
EPHA3P29320 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC15.16■□□□□ 0.02
EPHA3P29320 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15.16■□□□□ 0.02
EPHA3P29320 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
EPHA3P29320 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
EPHA3P29320 MIR346-201ENST00000362234 95 ntBASIC15.16■□□□□ 0.02
EPHA3P29320 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
EPHA3P29320 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.16■□□□□ 0.02
EPHA3P29320 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
EPHA3P29320 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.16■□□□□ 0.02
EPHA3P29320 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.16■□□□□ 0.02
EPHA3P29320 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.16■□□□□ 0.02
EPHA3P29320 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.16■□□□□ 0.02
EPHA3P29320 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
EPHA3P29320 AC026979.3-201ENST00000607315 403 ntBASIC15.16■□□□□ 0.02
EPHA3P29320 AC091812.2-201ENST00000619081 385 ntBASIC15.16■□□□□ 0.02
EPHA3P29320 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
EPHA3P29320 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.16■□□□□ 0.02
EPHA3P29320 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
EPHA3P29320 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
EPHA3P29320 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
EPHA3P29320 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
EPHA3P29320 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
EPHA3P29320 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.16■□□□□ 0.02
EPHA3P29320 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
EPHA3P29320 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
EPHA3P29320 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
EPHA3P29320 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.16■□□□□ 0.02
EPHA3P29320 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.16■□□□□ 0.02
EPHA3P29320 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
EPHA3P29320 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
EPHA3P29320 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
EPHA3P29320 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
EPHA3P29320 MTHFR-210ENST00000641407 2387 ntBASIC15.16■□□□□ 0.02
EPHA3P29320 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
EPHA3P29320 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
EPHA3P29320 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
EPHA3P29320 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
EPHA3P29320 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.15■□□□□ 0.02
EPHA3P29320 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
EPHA3P29320 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
EPHA3P29320 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
EPHA3P29320 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
EPHA3P29320 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.15■□□□□ 0.02
EPHA3P29320 REXO1L2P-201ENST00000425429 2069 ntBASIC15.15■□□□□ 0.02
EPHA3P29320 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
EPHA3P29320 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
EPHA3P29320 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
EPHA3P29320 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
EPHA3P29320 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
EPHA3P29320 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
EPHA3P29320 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
EPHA3P29320 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
EPHA3P29320 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.15■□□□□ 0.02
EPHA3P29320 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
EPHA3P29320 AL450487.1-201ENST00000426799 995 ntBASIC15.15■□□□□ 0.02
EPHA3P29320 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.15■□□□□ 0.02
EPHA3P29320 AC009078.2-202ENST00000463353 338 ntBASIC15.15■□□□□ 0.02
EPHA3P29320 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
EPHA3P29320 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
EPHA3P29320 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
EPHA3P29320 AC243562.1-201ENST00000560672 389 ntBASIC15.15■□□□□ 0.02
EPHA3P29320 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.15■□□□□ 0.02
EPHA3P29320 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.15■□□□□ 0.02
EPHA3P29320 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.15■□□□□ 0.02
EPHA3P29320 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.15■□□□□ 0.02
EPHA3P29320 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
EPHA3P29320 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.15■□□□□ 0.02
EPHA3P29320 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.15■□□□□ 0.02
EPHA3P29320 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
EPHA3P29320 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
EPHA3P29320 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
EPHA3P29320 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC15.15■□□□□ 0.02
EPHA3P29320 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
EPHA3P29320 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
EPHA3P29320 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.15■□□□□ 0.02
EPHA3P29320 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC15.15■□□□□ 0.02
EPHA3P29320 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
EPHA3P29320 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
EPHA3P29320 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
EPHA3P29320 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
EPHA3P29320 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
EPHA3P29320 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
EPHA3P29320 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.15■□□□□ 0.02
EPHA3P29320 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
EPHA3P29320 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
EPHA3P29320 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
EPHA3P29320 AC097359.2-201ENST00000604992 2389 ntBASIC15.14■□□□□ 0.01
EPHA3P29320 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
EPHA3P29320 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
EPHA3P29320 AP000845.1-201ENST00000581677 2131 ntBASIC15.14■□□□□ 0.01
EPHA3P29320 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.14■□□□□ 0.01
EPHA3P29320 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.14■□□□□ 0.01
EPHA3P29320 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
EPHA3P29320 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
EPHA3P29320 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms