Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.94■□□□□ 0.94
ATF3P18847 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATF3P18847 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC20.94■□□□□ 0.94
ATF3P18847 SERF2-206ENST00000409291 807 ntTSL 3 BASIC20.94■□□□□ 0.94
ATF3P18847 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATF3P18847 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC20.94■□□□□ 0.94
ATF3P18847 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC20.94■□□□□ 0.94
ATF3P18847 CCNC-217ENST00000523985 958 ntTSL 2 BASIC20.94■□□□□ 0.94
ATF3P18847 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC20.94■□□□□ 0.94
ATF3P18847 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC20.94■□□□□ 0.94
ATF3P18847 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATF3P18847 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ATF3P18847 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATF3P18847 AC092171.3-201ENST00000610122 2651 ntBASIC20.94■□□□□ 0.94
ATF3P18847 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
ATF3P18847 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATF3P18847 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATF3P18847 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
ATF3P18847 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ATF3P18847 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATF3P18847 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATF3P18847 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATF3P18847 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATF3P18847 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC20.94■□□□□ 0.94
ATF3P18847 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC20.94■□□□□ 0.94
ATF3P18847 AMT-239ENST00000636865 1914 ntTSL 5 BASIC20.94■□□□□ 0.94
ATF3P18847 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATF3P18847 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATF3P18847 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
ATF3P18847 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC20.94■□□□□ 0.94
ATF3P18847 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ATF3P18847 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATF3P18847 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATF3P18847 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
ATF3P18847 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ATF3P18847 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATF3P18847 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATF3P18847 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATF3P18847 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
ATF3P18847 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATF3P18847 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATF3P18847 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATF3P18847 RBM38-204ENST00000371219 760 ntTSL 2 BASIC20.93■□□□□ 0.94
ATF3P18847 AL512430.1-201ENST00000392575 860 ntBASIC20.93■□□□□ 0.94
ATF3P18847 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ATF3P18847 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC20.93■□□□□ 0.94
ATF3P18847 AC130709.1-201ENST00000484779 1212 ntBASIC20.93■□□□□ 0.94
ATF3P18847 AC010234.1-201ENST00000494599 870 ntBASIC20.93■□□□□ 0.94
ATF3P18847 AC026434.2-201ENST00000506094 1078 ntBASIC20.93■□□□□ 0.94
ATF3P18847 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
ATF3P18847 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC20.93■□□□□ 0.94
ATF3P18847 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
ATF3P18847 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATF3P18847 AL109837.1-201ENST00000603272 613 ntBASIC20.93■□□□□ 0.94
ATF3P18847 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC20.93■□□□□ 0.94
ATF3P18847 MBLAC2-202ENST00000514906 1936 ntBASIC20.93■□□□□ 0.94
ATF3P18847 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC20.93■□□□□ 0.94
ATF3P18847 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
ATF3P18847 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
ATF3P18847 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
ATF3P18847 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATF3P18847 FAM90A7P-201ENST00000382628 1395 ntBASIC20.93■□□□□ 0.94
ATF3P18847 FAM90A23P-201ENST00000400136 1395 ntBASIC20.93■□□□□ 0.94
ATF3P18847 OR6D1P-203ENST00000641209 4860 ntBASIC20.93■□□□□ 0.94
ATF3P18847 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
ATF3P18847 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC20.93■□□□□ 0.94
ATF3P18847 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC20.93■□□□□ 0.94
ATF3P18847 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATF3P18847 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ATF3P18847 AC084364.1-201ENST00000551967 1556 ntBASIC20.93■□□□□ 0.94
ATF3P18847 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC20.93■□□□□ 0.94
ATF3P18847 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ATF3P18847 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
ATF3P18847 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
ATF3P18847 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
ATF3P18847 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATF3P18847 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC20.92■□□□□ 0.94
ATF3P18847 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC20.92■□□□□ 0.94
ATF3P18847 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATF3P18847 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATF3P18847 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATF3P18847 HLA-K-203ENST00000430151 1046 ntBASIC20.92■□□□□ 0.94
ATF3P18847 AC026320.2-201ENST00000434379 478 ntBASIC20.92■□□□□ 0.94
ATF3P18847 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC20.92■□□□□ 0.94
ATF3P18847 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC20.92■□□□□ 0.94
ATF3P18847 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATF3P18847 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC20.92■□□□□ 0.94
ATF3P18847 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC20.92■□□□□ 0.94
ATF3P18847 AL008718.2-201ENST00000609206 1313 ntBASIC20.92■□□□□ 0.94
ATF3P18847 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATF3P18847 KRT8P21-201ENST00000430398 1491 ntBASIC20.92■□□□□ 0.94
ATF3P18847 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC20.92■□□□□ 0.94
ATF3P18847 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC20.92■□□□□ 0.94
ATF3P18847 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATF3P18847 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC20.92■□□□□ 0.94
ATF3P18847 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC20.92■□□□□ 0.94
ATF3P18847 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATF3P18847 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC20.92■□□□□ 0.94
ATF3P18847 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATF3P18847 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms