Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC16.33■□□□□ 0.2
RARAP10276 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RARAP10276 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RARAP10276 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RARAP10276 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
RARAP10276 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RARAP10276 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RARAP10276 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RARAP10276 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RARAP10276 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RARAP10276 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RARAP10276 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RARAP10276 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.32■□□□□ 0.2
RARAP10276 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RARAP10276 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RARAP10276 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RARAP10276 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RARAP10276 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RARAP10276 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RARAP10276 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.32■□□□□ 0.2
RARAP10276 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.32■□□□□ 0.2
RARAP10276 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC16.32■□□□□ 0.2
RARAP10276 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.32■□□□□ 0.2
RARAP10276 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC16.32■□□□□ 0.2
RARAP10276 METTL21AP1-201ENST00000438852 635 ntBASIC16.32■□□□□ 0.2
RARAP10276 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.32■□□□□ 0.2
RARAP10276 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RARAP10276 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.32■□□□□ 0.2
RARAP10276 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.32■□□□□ 0.2
RARAP10276 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RARAP10276 AC067863.1-201ENST00000494933 530 ntBASIC16.32■□□□□ 0.2
RARAP10276 AC097493.3-201ENST00000509725 367 ntBASIC16.32■□□□□ 0.2
RARAP10276 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.32■□□□□ 0.2
RARAP10276 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.32■□□□□ 0.2
RARAP10276 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RARAP10276 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RARAP10276 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RARAP10276 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.32■□□□□ 0.2
RARAP10276 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RARAP10276 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.32■□□□□ 0.2
RARAP10276 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.32■□□□□ 0.2
RARAP10276 AL390755.1-201ENST00000623716 2027 ntBASIC16.32■□□□□ 0.2
RARAP10276 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RARAP10276 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.32■□□□□ 0.2
RARAP10276 AF228730.6-201ENST00000641497 218 ntBASIC16.32■□□□□ 0.2
RARAP10276 AC084121.3-201ENST00000641716 218 ntBASIC16.32■□□□□ 0.2
RARAP10276 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RARAP10276 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RARAP10276 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RARAP10276 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RARAP10276 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RARAP10276 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RARAP10276 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC16.32■□□□□ 0.2
RARAP10276 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RARAP10276 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RARAP10276 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC16.31■□□□□ 0.2
RARAP10276 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RARAP10276 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
RARAP10276 R3HDM2P2-201ENST00000401880 2116 ntBASIC16.31■□□□□ 0.2
RARAP10276 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
RARAP10276 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.31■□□□□ 0.2
RARAP10276 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RARAP10276 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RARAP10276 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.31■□□□□ 0.2
RARAP10276 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RARAP10276 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RARAP10276 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RARAP10276 AC007686.3-201ENST00000619017 3487 ntBASIC16.31■□□□□ 0.2
RARAP10276 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RARAP10276 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RARAP10276 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RARAP10276 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.31■□□□□ 0.2
RARAP10276 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RARAP10276 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC16.31■□□□□ 0.2
RARAP10276 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.31■□□□□ 0.2
RARAP10276 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RARAP10276 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RARAP10276 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RARAP10276 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RARAP10276 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RARAP10276 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RARAP10276 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RARAP10276 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.31■□□□□ 0.2
RARAP10276 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.31■□□□□ 0.2
RARAP10276 TREML5P-201ENST00000421694 576 ntBASIC16.31■□□□□ 0.2
RARAP10276 FAM86GP-201ENST00000448322 971 ntBASIC16.31■□□□□ 0.2
RARAP10276 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.31■□□□□ 0.2
RARAP10276 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.31■□□□□ 0.2
RARAP10276 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.31■□□□□ 0.2
RARAP10276 RN7SL618P-201ENST00000477850 296 ntBASIC16.31■□□□□ 0.2
RARAP10276 SLED1-202ENST00000512051 380 ntBASIC16.31■□□□□ 0.2
RARAP10276 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.31■□□□□ 0.2
RARAP10276 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.31■□□□□ 0.2
RARAP10276 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.31■□□□□ 0.2
RARAP10276 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.31■□□□□ 0.2
RARAP10276 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.31■□□□□ 0.2
RARAP10276 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RARAP10276 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RARAP10276 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RARAP10276 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms