Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
HOXC4P09017 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HOXC4P09017 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.01□□□□□ -0.01
HOXC4P09017 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HOXC4P09017 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HOXC4P09017 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
HOXC4P09017 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HOXC4P09017 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC15□□□□□ -0.01
HOXC4P09017 AC092850.2-201ENST00000623821 2697 ntBASIC15□□□□□ -0.01
HOXC4P09017 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HOXC4P09017 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC15□□□□□ -0.01
HOXC4P09017 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
HOXC4P09017 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
HOXC4P09017 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15□□□□□ -0.01
HOXC4P09017 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HOXC4P09017 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15□□□□□ -0.01
HOXC4P09017 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HOXC4P09017 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HOXC4P09017 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15□□□□□ -0.01
HOXC4P09017 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15□□□□□ -0.01
HOXC4P09017 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15□□□□□ -0.01
HOXC4P09017 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15□□□□□ -0.01
HOXC4P09017 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
HOXC4P09017 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HOXC4P09017 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HOXC4P09017 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15□□□□□ -0.01
HOXC4P09017 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HOXC4P09017 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
HOXC4P09017 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15□□□□□ -0.01
HOXC4P09017 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HOXC4P09017 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
HOXC4P09017 PRAL-201ENST00000624952 3286 ntBASIC15□□□□□ -0.01
HOXC4P09017 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HOXC4P09017 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HOXC4P09017 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
HOXC4P09017 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15□□□□□ -0.01
HOXC4P09017 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC15□□□□□ -0.01
HOXC4P09017 MPV17-205ENST00000402310 906 ntTSL 5 BASIC15□□□□□ -0.01
HOXC4P09017 POM121L8P-201ENST00000417732 1281 ntBASIC15□□□□□ -0.01
HOXC4P09017 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15□□□□□ -0.01
HOXC4P09017 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
HOXC4P09017 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC15□□□□□ -0.01
HOXC4P09017 ACTBP11-201ENST00000436287 1126 ntBASIC15□□□□□ -0.01
HOXC4P09017 POM121L9P-203ENST00000441984 1285 ntBASIC15□□□□□ -0.01
HOXC4P09017 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
HOXC4P09017 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15□□□□□ -0.01
HOXC4P09017 AC092658.1-201ENST00000505836 891 ntBASIC15□□□□□ -0.01
HOXC4P09017 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15□□□□□ -0.01
HOXC4P09017 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
HOXC4P09017 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC15□□□□□ -0.01
HOXC4P09017 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC15□□□□□ -0.01
HOXC4P09017 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC15□□□□□ -0.01
HOXC4P09017 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15□□□□□ -0.01
HOXC4P09017 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15□□□□□ -0.01
HOXC4P09017 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC15□□□□□ -0.01
HOXC4P09017 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
HOXC4P09017 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
HOXC4P09017 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15□□□□□ -0.01
HOXC4P09017 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HOXC4P09017 REXO1L6P-201ENST00000603433 1515 ntBASIC15□□□□□ -0.01
HOXC4P09017 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15□□□□□ -0.01
HOXC4P09017 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HOXC4P09017 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15□□□□□ -0.01
HOXC4P09017 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HOXC4P09017 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
HOXC4P09017 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HOXC4P09017 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15□□□□□ -0.01
HOXC4P09017 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HOXC4P09017 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
HOXC4P09017 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15□□□□□ -0.01
HOXC4P09017 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HOXC4P09017 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HOXC4P09017 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HOXC4P09017 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
HOXC4P09017 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
HOXC4P09017 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
HOXC4P09017 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
HOXC4P09017 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
HOXC4P09017 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
HOXC4P09017 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HOXC4P09017 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HOXC4P09017 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
HOXC4P09017 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC14.99□□□□□ -0.01
HOXC4P09017 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HOXC4P09017 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.99□□□□□ -0.01
HOXC4P09017 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HOXC4P09017 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HOXC4P09017 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
HOXC4P09017 AC126365.1-201ENST00000578585 1514 ntBASIC14.99□□□□□ -0.01
HOXC4P09017 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HOXC4P09017 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.99□□□□□ -0.01
HOXC4P09017 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HOXC4P09017 MIR1202-201ENST00000408529 83 ntBASIC14.99□□□□□ -0.01
HOXC4P09017 MIR1908-201ENST00000410394 80 ntBASIC14.99□□□□□ -0.01
HOXC4P09017 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HOXC4P09017 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.99□□□□□ -0.01
HOXC4P09017 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HOXC4P09017 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
HOXC4P09017 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.99□□□□□ -0.01
HOXC4P09017 ECM1P1-201ENST00000604092 1279 ntBASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms