Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TPM3P06753 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TPM3P06753 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.49■□□□□ 0.39
TPM3P06753 HCG4B-203ENST00000450128 991 ntBASIC17.49■□□□□ 0.39
TPM3P06753 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
TPM3P06753 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.49■□□□□ 0.39
TPM3P06753 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.49■□□□□ 0.39
TPM3P06753 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
TPM3P06753 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
TPM3P06753 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TPM3P06753 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC17.49■□□□□ 0.39
TPM3P06753 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
TPM3P06753 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TPM3P06753 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TPM3P06753 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC17.49■□□□□ 0.39
TPM3P06753 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TPM3P06753 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TPM3P06753 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TPM3P06753 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TPM3P06753 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC17.49■□□□□ 0.39
TPM3P06753 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TPM3P06753 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.49■□□□□ 0.39
TPM3P06753 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TPM3P06753 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC17.49■□□□□ 0.39
TPM3P06753 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TPM3P06753 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
TPM3P06753 MBLAC2-202ENST00000514906 1936 ntBASIC17.49■□□□□ 0.39
TPM3P06753 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TPM3P06753 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TPM3P06753 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC17.48■□□□□ 0.39
TPM3P06753 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TPM3P06753 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
TPM3P06753 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
TPM3P06753 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TPM3P06753 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TPM3P06753 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TPM3P06753 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TPM3P06753 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
TPM3P06753 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TPM3P06753 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TPM3P06753 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TPM3P06753 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TPM3P06753 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TPM3P06753 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
TPM3P06753 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TPM3P06753 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.48■□□□□ 0.39
TPM3P06753 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
TPM3P06753 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.48■□□□□ 0.39
TPM3P06753 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.48■□□□□ 0.39
TPM3P06753 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC17.48■□□□□ 0.39
TPM3P06753 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TPM3P06753 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.48■□□□□ 0.39
TPM3P06753 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TPM3P06753 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
TPM3P06753 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TPM3P06753 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.48■□□□□ 0.39
TPM3P06753 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TPM3P06753 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC17.47■□□□□ 0.39
TPM3P06753 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TPM3P06753 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TPM3P06753 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC17.47■□□□□ 0.39
TPM3P06753 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TPM3P06753 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
TPM3P06753 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TPM3P06753 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
TPM3P06753 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC17.47■□□□□ 0.39
TPM3P06753 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
TPM3P06753 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC17.47■□□□□ 0.39
TPM3P06753 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TPM3P06753 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TPM3P06753 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TPM3P06753 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TPM3P06753 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.47■□□□□ 0.39
TPM3P06753 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.47■□□□□ 0.39
TPM3P06753 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.47■□□□□ 0.39
TPM3P06753 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.47■□□□□ 0.39
TPM3P06753 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
TPM3P06753 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.47■□□□□ 0.39
TPM3P06753 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
TPM3P06753 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
TPM3P06753 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TPM3P06753 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
TPM3P06753 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
TPM3P06753 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
TPM3P06753 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC17.47■□□□□ 0.39
TPM3P06753 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
TPM3P06753 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
TPM3P06753 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TPM3P06753 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TPM3P06753 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TPM3P06753 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TPM3P06753 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TPM3P06753 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TPM3P06753 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TPM3P06753 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TPM3P06753 AC092135.3-201ENST00000624151 1846 ntBASIC17.47■□□□□ 0.39
TPM3P06753 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TPM3P06753 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC17.47■□□□□ 0.39
TPM3P06753 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TPM3P06753 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms