Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P04436 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
P04436 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.17□□□□□ -0.14
P04436 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14.17□□□□□ -0.14
P04436 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
P04436 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.17□□□□□ -0.14
P04436 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.17□□□□□ -0.14
P04436 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
P04436 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.17□□□□□ -0.14
P04436 ATP5G2P4-201ENST00000442175 420 ntBASIC14.17□□□□□ -0.14
P04436 AL355864.2-201ENST00000447420 863 ntBASIC14.17□□□□□ -0.14
P04436 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.17□□□□□ -0.14
P04436 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
P04436 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.17□□□□□ -0.14
P04436 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.17□□□□□ -0.14
P04436 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.17□□□□□ -0.14
P04436 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.17□□□□□ -0.14
P04436 IGHV3-71-201ENST00000523324 359 ntBASIC14.17□□□□□ -0.14
P04436 APRT-204ENST00000563655 709 ntTSL 5 BASIC14.17□□□□□ -0.14
P04436 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC14.17□□□□□ -0.14
P04436 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.17□□□□□ -0.14
P04436 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.17□□□□□ -0.14
P04436 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
P04436 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.17□□□□□ -0.14
P04436 BTNL10-201ENST00000595971 695 ntBASIC14.17□□□□□ -0.14
P04436 AC233724.13-201ENST00000598383 410 ntBASIC14.17□□□□□ -0.14
P04436 AC017083.2-201ENST00000608069 979 ntBASIC14.17□□□□□ -0.14
P04436 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.17□□□□□ -0.14
P04436 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.17□□□□□ -0.14
P04436 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
P04436 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
P04436 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P04436 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.17□□□□□ -0.14
P04436 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.17□□□□□ -0.14
P04436 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
P04436 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.17□□□□□ -0.14
P04436 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P04436 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
P04436 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
P04436 AL161772.1-201ENST00000610494 4412 ntBASIC14.17□□□□□ -0.14
P04436 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P04436 AC084364.1-201ENST00000551967 1556 ntBASIC14.17□□□□□ -0.14
P04436 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.17□□□□□ -0.14
P04436 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
P04436 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.17□□□□□ -0.14
P04436 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
P04436 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
P04436 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
P04436 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
P04436 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
P04436 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
P04436 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
P04436 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
P04436 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC14.16□□□□□ -0.14
P04436 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
P04436 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
P04436 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
P04436 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.16□□□□□ -0.14
P04436 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.16□□□□□ -0.14
P04436 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
P04436 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.16□□□□□ -0.14
P04436 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
P04436 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
P04436 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
P04436 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
P04436 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
P04436 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
P04436 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC14.16□□□□□ -0.14
P04436 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
P04436 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
P04436 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.16□□□□□ -0.14
P04436 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
P04436 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.16□□□□□ -0.14
P04436 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC14.16□□□□□ -0.14
P04436 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
P04436 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.16□□□□□ -0.14
P04436 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
P04436 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC14.16□□□□□ -0.14
P04436 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
P04436 AC068587.3-201ENST00000526613 355 ntBASIC14.16□□□□□ -0.14
P04436 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
P04436 SLC25A47P1-201ENST00000531577 414 ntBASIC14.16□□□□□ -0.14
P04436 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
P04436 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC14.16□□□□□ -0.14
P04436 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.16□□□□□ -0.14
P04436 AL022328.1-201ENST00000610050 478 ntBASIC14.16□□□□□ -0.14
P04436 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.16□□□□□ -0.14
P04436 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
P04436 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
P04436 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.16□□□□□ -0.14
P04436 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
P04436 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
P04436 AL138799.1-201ENST00000448213 1675 ntBASIC14.16□□□□□ -0.14
P04436 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
P04436 AC008894.3-201ENST00000624324 3103 ntBASIC14.16□□□□□ -0.14
P04436 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
P04436 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.16□□□□□ -0.14
P04436 TNRC18P3-201ENST00000441896 2691 ntBASIC14.16□□□□□ -0.14
P04436 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
P04436 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms