Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC16.5■□□□□ 0.23
TIMP1P01033 VDAC1P1-201ENST00000439229 848 ntBASIC16.5■□□□□ 0.23
TIMP1P01033 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC16.5■□□□□ 0.23
TIMP1P01033 AC026434.2-201ENST00000506094 1078 ntBASIC16.5■□□□□ 0.23
TIMP1P01033 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
TIMP1P01033 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC16.5■□□□□ 0.23
TIMP1P01033 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC16.5■□□□□ 0.23
TIMP1P01033 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TIMP1P01033 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC16.5■□□□□ 0.23
TIMP1P01033 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TIMP1P01033 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
TIMP1P01033 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC16.5■□□□□ 0.23
TIMP1P01033 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
TIMP1P01033 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TIMP1P01033 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.5■□□□□ 0.23
TIMP1P01033 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TIMP1P01033 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TIMP1P01033 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.5■□□□□ 0.23
TIMP1P01033 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TIMP1P01033 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TIMP1P01033 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TIMP1P01033 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC16.5■□□□□ 0.23
TIMP1P01033 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
TIMP1P01033 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.5■□□□□ 0.23
TIMP1P01033 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TIMP1P01033 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TIMP1P01033 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.49■□□□□ 0.23
TIMP1P01033 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.49■□□□□ 0.23
TIMP1P01033 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
TIMP1P01033 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
TIMP1P01033 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TIMP1P01033 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
TIMP1P01033 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TIMP1P01033 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TIMP1P01033 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TIMP1P01033 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TIMP1P01033 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.49■□□□□ 0.23
TIMP1P01033 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TIMP1P01033 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
TIMP1P01033 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TIMP1P01033 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC16.49■□□□□ 0.23
TIMP1P01033 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TIMP1P01033 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC16.49■□□□□ 0.23
TIMP1P01033 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TIMP1P01033 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
TIMP1P01033 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TIMP1P01033 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TIMP1P01033 RPL7P35-201ENST00000446943 740 ntBASIC16.49■□□□□ 0.23
TIMP1P01033 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC16.49■□□□□ 0.23
TIMP1P01033 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC16.49■□□□□ 0.23
TIMP1P01033 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC16.49■□□□□ 0.23
TIMP1P01033 AC009084.3-201ENST00000623356 437 ntBASIC16.49■□□□□ 0.23
TIMP1P01033 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TIMP1P01033 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TIMP1P01033 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.49■□□□□ 0.23
TIMP1P01033 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.49■□□□□ 0.23
TIMP1P01033 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC16.49■□□□□ 0.23
TIMP1P01033 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TIMP1P01033 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
TIMP1P01033 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TIMP1P01033 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.49■□□□□ 0.23
TIMP1P01033 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.49■□□□□ 0.23
TIMP1P01033 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TIMP1P01033 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TIMP1P01033 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TIMP1P01033 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TIMP1P01033 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TIMP1P01033 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TIMP1P01033 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.48■□□□□ 0.23
TIMP1P01033 AC069224.1-201ENST00000566372 1715 ntBASIC16.48■□□□□ 0.23
TIMP1P01033 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TIMP1P01033 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC16.48■□□□□ 0.23
TIMP1P01033 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
TIMP1P01033 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.48■□□□□ 0.23
TIMP1P01033 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
TIMP1P01033 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.48■□□□□ 0.23
TIMP1P01033 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TIMP1P01033 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
TIMP1P01033 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TIMP1P01033 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TIMP1P01033 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TIMP1P01033 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TIMP1P01033 PFN2-202ENST00000423691 911 ntTSL 2 BASIC16.48■□□□□ 0.23
TIMP1P01033 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC16.48■□□□□ 0.23
TIMP1P01033 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC16.48■□□□□ 0.23
TIMP1P01033 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC16.48■□□□□ 0.23
TIMP1P01033 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC16.48■□□□□ 0.23
TIMP1P01033 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC16.48■□□□□ 0.23
TIMP1P01033 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC16.48■□□□□ 0.23
TIMP1P01033 AC008805.1-201ENST00000590892 364 ntBASIC16.48■□□□□ 0.23
TIMP1P01033 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TIMP1P01033 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TIMP1P01033 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.48■□□□□ 0.23
TIMP1P01033 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
TIMP1P01033 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TIMP1P01033 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TIMP1P01033 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.48■□□□□ 0.23
TIMP1P01033 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TIMP1P01033 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.48■□□□□ 0.23
TIMP1P01033 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms