Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ALX3O95076 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
ALX3O95076 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ALX3O95076 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.84□□□□□ -0.19
ALX3O95076 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ALX3O95076 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ALX3O95076 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
ALX3O95076 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.84□□□□□ -0.19
ALX3O95076 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.84□□□□□ -0.19
ALX3O95076 AL928921.2-201ENST00000641325 2442 ntBASIC13.84□□□□□ -0.19
ALX3O95076 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
ALX3O95076 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ALX3O95076 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
ALX3O95076 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC13.84□□□□□ -0.19
ALX3O95076 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.84□□□□□ -0.19
ALX3O95076 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.84□□□□□ -0.19
ALX3O95076 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ALX3O95076 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ALX3O95076 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC13.84□□□□□ -0.19
ALX3O95076 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ALX3O95076 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ALX3O95076 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
ALX3O95076 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
ALX3O95076 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ALX3O95076 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
ALX3O95076 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.84□□□□□ -0.19
ALX3O95076 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ALX3O95076 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ALX3O95076 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ALX3O95076 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ALX3O95076 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ALX3O95076 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
ALX3O95076 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ALX3O95076 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
ALX3O95076 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ALX3O95076 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC13.84□□□□□ -0.19
ALX3O95076 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC13.84□□□□□ -0.19
ALX3O95076 AC243562.2-201ENST00000561247 970 ntBASIC13.84□□□□□ -0.19
ALX3O95076 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC13.84□□□□□ -0.19
ALX3O95076 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.84□□□□□ -0.19
ALX3O95076 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC13.84□□□□□ -0.19
ALX3O95076 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC13.84□□□□□ -0.19
ALX3O95076 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC13.84□□□□□ -0.19
ALX3O95076 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC13.84□□□□□ -0.19
ALX3O95076 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC13.84□□□□□ -0.19
ALX3O95076 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC13.84□□□□□ -0.19
ALX3O95076 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ALX3O95076 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
ALX3O95076 FLJ16779-201ENST00000612722 7638 ntBASIC13.84□□□□□ -0.19
ALX3O95076 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC13.84□□□□□ -0.19
ALX3O95076 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ALX3O95076 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ALX3O95076 LINC01230-201ENST00000625222 3017 ntBASIC13.84□□□□□ -0.19
ALX3O95076 BCAR1-209ENST00000546196 1340 ntBASIC13.84□□□□□ -0.19
ALX3O95076 AC091951.1-201ENST00000512854 2465 ntBASIC13.84□□□□□ -0.19
ALX3O95076 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
ALX3O95076 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
ALX3O95076 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ALX3O95076 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.83□□□□□ -0.19
ALX3O95076 PPT1-213ENST00000641319 2388 ntBASIC13.83□□□□□ -0.19
ALX3O95076 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.19
ALX3O95076 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC13.83□□□□□ -0.19
ALX3O95076 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
ALX3O95076 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
ALX3O95076 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
ALX3O95076 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ALX3O95076 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
ALX3O95076 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ALX3O95076 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
ALX3O95076 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
ALX3O95076 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
ALX3O95076 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ALX3O95076 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
ALX3O95076 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ALX3O95076 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ALX3O95076 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ALX3O95076 RPS8P6-201ENST00000426177 609 ntBASIC13.83□□□□□ -0.2
ALX3O95076 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC13.83□□□□□ -0.2
ALX3O95076 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC13.83□□□□□ -0.2
ALX3O95076 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC13.83□□□□□ -0.2
ALX3O95076 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.83□□□□□ -0.2
ALX3O95076 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC13.83□□□□□ -0.2
ALX3O95076 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC13.83□□□□□ -0.2
ALX3O95076 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
ALX3O95076 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC13.83□□□□□ -0.2
ALX3O95076 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC13.83□□□□□ -0.2
ALX3O95076 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC13.83□□□□□ -0.2
ALX3O95076 AC068137.2-201ENST00000605408 478 ntBASIC13.83□□□□□ -0.2
ALX3O95076 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ALX3O95076 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.83□□□□□ -0.2
ALX3O95076 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ALX3O95076 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
ALX3O95076 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
ALX3O95076 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ALX3O95076 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
ALX3O95076 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ALX3O95076 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
ALX3O95076 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ALX3O95076 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.83□□□□□ -0.2
ALX3O95076 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms