Protein–RNA interactions for Protein: O60494

CUBN, Cubilin, humanhuman

Predictions only

Length 3,623 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNO60494 PLS3-210ENST00000626746 216 ntTSL 4 BASIC12.18□□□□□ -0.46
CUBNO60494 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CUBNO60494 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CUBNO60494 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC12.18□□□□□ -0.46
CUBNO60494 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CUBNO60494 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CUBNO60494 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CUBNO60494 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
CUBNO60494 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CUBNO60494 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
CUBNO60494 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CUBNO60494 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CUBNO60494 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CUBNO60494 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
CUBNO60494 MBLAC2-202ENST00000514906 1936 ntBASIC12.18□□□□□ -0.46
CUBNO60494 AC073150.1-201ENST00000450406 1084 ntBASIC12.18□□□□□ -0.46
CUBNO60494 AL157792.1-201ENST00000488281 530 ntBASIC12.18□□□□□ -0.46
CUBNO60494 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC12.18□□□□□ -0.46
CUBNO60494 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
CUBNO60494 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
CUBNO60494 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC12.18□□□□□ -0.46
CUBNO60494 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC12.18□□□□□ -0.46
CUBNO60494 AL161773.1-201ENST00000624845 863 ntBASIC12.18□□□□□ -0.46
CUBNO60494 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CUBNO60494 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC12.18□□□□□ -0.46
CUBNO60494 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
CUBNO60494 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CUBNO60494 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
CUBNO60494 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CUBNO60494 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
CUBNO60494 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CUBNO60494 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CUBNO60494 TPM3P8-201ENST00000330554 643 ntBASIC12.17□□□□□ -0.46
CUBNO60494 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC12.17□□□□□ -0.46
CUBNO60494 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CUBNO60494 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
CUBNO60494 NAT9-211ENST00000580632 799 ntTSL 3 BASIC12.17□□□□□ -0.46
CUBNO60494 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC12.17□□□□□ -0.46
CUBNO60494 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CUBNO60494 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CUBNO60494 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CUBNO60494 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC12.17□□□□□ -0.46
CUBNO60494 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CUBNO60494 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
CUBNO60494 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CUBNO60494 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
CUBNO60494 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CUBNO60494 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CUBNO60494 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CUBNO60494 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC12.17□□□□□ -0.46
CUBNO60494 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CUBNO60494 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC12.17□□□□□ -0.46
CUBNO60494 AL118516.1-201ENST00000564152 670 ntBASIC12.17□□□□□ -0.46
CUBNO60494 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CUBNO60494 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
CUBNO60494 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC12.17□□□□□ -0.46
CUBNO60494 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CUBNO60494 AC092127.1-201ENST00000567093 3455 ntBASIC12.17□□□□□ -0.46
CUBNO60494 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CUBNO60494 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC12.17□□□□□ -0.46
CUBNO60494 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
CUBNO60494 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CUBNO60494 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CUBNO60494 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CUBNO60494 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CUBNO60494 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CUBNO60494 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
CUBNO60494 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CUBNO60494 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC12.17□□□□□ -0.46
CUBNO60494 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CUBNO60494 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC12.17□□□□□ -0.46
CUBNO60494 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CUBNO60494 AC015909.3-201ENST00000572855 1794 ntBASIC12.16□□□□□ -0.46
CUBNO60494 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CUBNO60494 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CUBNO60494 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CUBNO60494 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
CUBNO60494 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CUBNO60494 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC12.16□□□□□ -0.46
CUBNO60494 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CUBNO60494 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
CUBNO60494 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
CUBNO60494 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CUBNO60494 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC12.16□□□□□ -0.46
CUBNO60494 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CUBNO60494 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC12.16□□□□□ -0.46
CUBNO60494 AC021723.1-201ENST00000486306 515 ntBASIC12.16□□□□□ -0.46
CUBNO60494 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC12.16□□□□□ -0.46
CUBNO60494 AC105137.3-201ENST00000617588 984 ntBASIC12.16□□□□□ -0.46
CUBNO60494 GPR39-203ENST00000622084 900 ntTSL 5 BASIC12.16□□□□□ -0.46
CUBNO60494 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC12.16□□□□□ -0.46
CUBNO60494 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
CUBNO60494 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CUBNO60494 AC006449.5-201ENST00000610658 2098 ntBASIC12.16□□□□□ -0.46
CUBNO60494 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
CUBNO60494 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CUBNO60494 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC12.16□□□□□ -0.46
CUBNO60494 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
CUBNO60494 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CUBNO60494 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms