Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC13.83□□□□□ -0.2
SGCEO43556 KLF2P3-201ENST00000451977 1087 ntBASIC13.83□□□□□ -0.2
SGCEO43556 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC13.83□□□□□ -0.2
SGCEO43556 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.83□□□□□ -0.2
SGCEO43556 HLA-V-204ENST00000476601 1289 ntBASIC13.83□□□□□ -0.2
SGCEO43556 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SGCEO43556 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.83□□□□□ -0.2
SGCEO43556 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC13.83□□□□□ -0.2
SGCEO43556 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.83□□□□□ -0.2
SGCEO43556 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.83□□□□□ -0.2
SGCEO43556 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SGCEO43556 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
SGCEO43556 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SGCEO43556 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SGCEO43556 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SGCEO43556 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SGCEO43556 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
SGCEO43556 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SGCEO43556 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SGCEO43556 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.83□□□□□ -0.2
SGCEO43556 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.83□□□□□ -0.2
SGCEO43556 AL607033.1-201ENST00000623900 1599 ntBASIC13.83□□□□□ -0.2
SGCEO43556 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SGCEO43556 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
SGCEO43556 AC127383.1-201ENST00000444697 1800 ntBASIC13.83□□□□□ -0.2
SGCEO43556 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SGCEO43556 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
SGCEO43556 FO538757.1-201ENST00000623083 1397 ntBASIC13.83□□□□□ -0.2
SGCEO43556 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
SGCEO43556 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SGCEO43556 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.82□□□□□ -0.2
SGCEO43556 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
SGCEO43556 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SGCEO43556 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
SGCEO43556 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SGCEO43556 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SGCEO43556 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.82□□□□□ -0.2
SGCEO43556 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SGCEO43556 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SGCEO43556 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
SGCEO43556 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC13.82□□□□□ -0.2
SGCEO43556 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
SGCEO43556 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SGCEO43556 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SGCEO43556 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SGCEO43556 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SGCEO43556 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SGCEO43556 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SGCEO43556 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SGCEO43556 BAD-202ENST00000394531 631 ntTSL 3 BASIC13.82□□□□□ -0.2
SGCEO43556 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
SGCEO43556 AC107890.1-201ENST00000422478 521 ntBASIC13.82□□□□□ -0.2
SGCEO43556 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC13.82□□□□□ -0.2
SGCEO43556 FAM86GP-201ENST00000448322 971 ntBASIC13.82□□□□□ -0.2
SGCEO43556 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.82□□□□□ -0.2
SGCEO43556 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.82□□□□□ -0.2
SGCEO43556 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.82□□□□□ -0.2
SGCEO43556 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SGCEO43556 AC069120.2-201ENST00000524091 540 ntBASIC13.82□□□□□ -0.2
SGCEO43556 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC13.82□□□□□ -0.2
SGCEO43556 BAD-207ENST00000544785 525 ntTSL 3 BASIC13.82□□□□□ -0.2
SGCEO43556 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC13.82□□□□□ -0.2
SGCEO43556 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.82□□□□□ -0.2
SGCEO43556 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.82□□□□□ -0.2
SGCEO43556 AC015911.4-201ENST00000588022 1070 ntBASIC13.82□□□□□ -0.2
SGCEO43556 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC13.82□□□□□ -0.2
SGCEO43556 AC093028.1-201ENST00000622998 982 ntBASIC13.82□□□□□ -0.2
SGCEO43556 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC13.82□□□□□ -0.2
SGCEO43556 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.82□□□□□ -0.2
SGCEO43556 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SGCEO43556 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SGCEO43556 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SGCEO43556 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SGCEO43556 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SGCEO43556 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SGCEO43556 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SGCEO43556 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SGCEO43556 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SGCEO43556 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SGCEO43556 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SGCEO43556 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SGCEO43556 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SGCEO43556 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SGCEO43556 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
SGCEO43556 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SGCEO43556 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SGCEO43556 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.81□□□□□ -0.2
SGCEO43556 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SGCEO43556 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SGCEO43556 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.81□□□□□ -0.2
SGCEO43556 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.81□□□□□ -0.2
SGCEO43556 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SGCEO43556 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.81□□□□□ -0.2
SGCEO43556 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
SGCEO43556 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
SGCEO43556 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
SGCEO43556 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.81□□□□□ -0.2
SGCEO43556 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SGCEO43556 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SGCEO43556 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms