Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 FP325318.1-201ENST00000616097 1263 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
MSH5O43196 MIR6752-201ENST00000618442 71 ntBASIC21.89■■□□□ 1.09
MSH5O43196 LINC01739-204ENST00000641712 1005 ntBASIC21.89■■□□□ 1.09
MSH5O43196 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
MSH5O43196 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
MSH5O43196 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC21.89■■□□□ 1.09
MSH5O43196 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
MSH5O43196 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
MSH5O43196 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC21.89■■□□□ 1.09
MSH5O43196 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
MSH5O43196 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC21.89■■□□□ 1.09
MSH5O43196 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
MSH5O43196 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
MSH5O43196 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
MSH5O43196 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
MSH5O43196 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
MSH5O43196 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MSH5O43196 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
MSH5O43196 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MSH5O43196 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
MSH5O43196 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
MSH5O43196 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
MSH5O43196 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
MSH5O43196 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MSH5O43196 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MSH5O43196 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC21.88■■□□□ 1.09
MSH5O43196 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MSH5O43196 INSL6-201ENST00000381641 758 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MSH5O43196 KRTAP3-3-201ENST00000391586 704 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
MSH5O43196 ACTG1P4-201ENST00000425123 1122 ntBASIC21.88■■□□□ 1.09
MSH5O43196 MTND4P28-201ENST00000426217 387 ntBASIC21.88■■□□□ 1.09
MSH5O43196 SPCS2P4-201ENST00000436160 681 ntBASIC21.88■■□□□ 1.09
MSH5O43196 ELOCP23-201ENST00000452014 332 ntBASIC21.88■■□□□ 1.09
MSH5O43196 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC21.88■■□□□ 1.09
MSH5O43196 AC096992.1-201ENST00000459808 709 ntBASIC21.88■■□□□ 1.09
MSH5O43196 SLC25A6P2-201ENST00000497974 877 ntBASIC21.88■■□□□ 1.09
MSH5O43196 AC069120.2-201ENST00000524091 540 ntBASIC21.88■■□□□ 1.09
MSH5O43196 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC21.88■■□□□ 1.09
MSH5O43196 AC017100.1-201ENST00000565978 1169 ntBASIC21.88■■□□□ 1.09
MSH5O43196 RARRES2P8-201ENST00000566335 367 ntBASIC21.88■■□□□ 1.09
MSH5O43196 AC008088.1-201ENST00000580993 280 ntBASIC21.88■■□□□ 1.09
MSH5O43196 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC21.88■■□□□ 1.09
MSH5O43196 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
MSH5O43196 AL359314.1-201ENST00000616913 261 ntBASIC21.88■■□□□ 1.09
MSH5O43196 AC025048.6-201ENST00000634326 1161 ntBASIC21.88■■□□□ 1.09
MSH5O43196 LINC01358-209ENST00000635072 1114 ntTSL 5 BASIC21.88■■□□□ 1.09
MSH5O43196 RAB34-224ENST00000636513 888 ntTSL 5 BASIC21.88■■□□□ 1.09
MSH5O43196 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC21.88■■□□□ 1.09
MSH5O43196 CCNG2-205ENST00000509972 1549 ntTSL 2 BASIC21.88■■□□□ 1.09
MSH5O43196 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC21.88■■□□□ 1.09
MSH5O43196 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MSH5O43196 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MSH5O43196 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
MSH5O43196 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC21.88■■□□□ 1.09
MSH5O43196 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MSH5O43196 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
MSH5O43196 GLYATL2-202ENST00000532258 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MSH5O43196 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MSH5O43196 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
MSH5O43196 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC21.88■■□□□ 1.09
MSH5O43196 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MSH5O43196 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MSH5O43196 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MSH5O43196 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MSH5O43196 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
MSH5O43196 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
MSH5O43196 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
MSH5O43196 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
MSH5O43196 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC21.87■■□□□ 1.09
MSH5O43196 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
MSH5O43196 AC129492.6-201ENST00000611383 1305 ntBASIC21.87■■□□□ 1.09
MSH5O43196 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
MSH5O43196 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
MSH5O43196 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC21.87■■□□□ 1.09
MSH5O43196 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
MSH5O43196 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
MSH5O43196 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC21.87■■□□□ 1.09
MSH5O43196 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
MSH5O43196 AL591499.1-201ENST00000307155 1153 ntBASIC21.87■■□□□ 1.09
MSH5O43196 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
MSH5O43196 SPDYE7P-202ENST00000420373 878 ntBASIC21.87■■□□□ 1.09
MSH5O43196 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
MSH5O43196 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
MSH5O43196 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
MSH5O43196 FCF1P6-201ENST00000456841 595 ntBASIC21.87■■□□□ 1.09
MSH5O43196 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC21.87■■□□□ 1.09
MSH5O43196 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC21.87■■□□□ 1.09
MSH5O43196 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC21.87■■□□□ 1.09
MSH5O43196 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC21.87■■□□□ 1.09
MSH5O43196 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC21.87■■□□□ 1.09
MSH5O43196 AC097493.3-201ENST00000509725 367 ntBASIC21.87■■□□□ 1.09
MSH5O43196 SERBP1P5-201ENST00000510079 1181 ntBASIC21.87■■□□□ 1.09
MSH5O43196 AC034244.2-201ENST00000514668 858 ntBASIC21.87■■□□□ 1.09
MSH5O43196 MORF4L1P3-201ENST00000525966 950 ntBASIC21.87■■□□□ 1.09
MSH5O43196 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC21.87■■□□□ 1.09
MSH5O43196 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC21.87■■□□□ 1.09
MSH5O43196 AC093014.1-201ENST00000548926 724 ntBASIC21.87■■□□□ 1.09
MSH5O43196 CD7-202ENST00000578509 925 ntTSL 3 BASIC21.87■■□□□ 1.09
MSH5O43196 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
MSH5O43196 AC011939.3-201ENST00000613686 466 ntBASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms