Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.69■□□□□ 0.1
TRIM38O00635 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.69■□□□□ 0.1
TRIM38O00635 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC15.69■□□□□ 0.1
TRIM38O00635 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.69■□□□□ 0.1
TRIM38O00635 AC025048.3-201ENST00000590609 569 ntBASIC15.69■□□□□ 0.1
TRIM38O00635 AC005702.4-201ENST00000618393 416 ntBASIC15.69■□□□□ 0.1
TRIM38O00635 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM38O00635 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM38O00635 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TRIM38O00635 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM38O00635 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.69■□□□□ 0.1
TRIM38O00635 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM38O00635 U82695.1-201ENST00000635752 1889 ntBASIC15.69■□□□□ 0.1
TRIM38O00635 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.69■□□□□ 0.1
TRIM38O00635 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.69■□□□□ 0.1
TRIM38O00635 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM38O00635 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM38O00635 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM38O00635 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.69■□□□□ 0.1
TRIM38O00635 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM38O00635 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TRIM38O00635 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM38O00635 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM38O00635 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM38O00635 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM38O00635 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM38O00635 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.68■□□□□ 0.1
TRIM38O00635 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
TRIM38O00635 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM38O00635 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM38O00635 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM38O00635 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM38O00635 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM38O00635 CYP4F24P-201ENST00000586049 1580 ntBASIC15.68■□□□□ 0.1
TRIM38O00635 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM38O00635 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM38O00635 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
TRIM38O00635 TMEM14DP-201ENST00000422205 345 ntBASIC15.68■□□□□ 0.1
TRIM38O00635 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.68■□□□□ 0.1
TRIM38O00635 RPS2P32-201ENST00000439199 892 ntBASIC15.68■□□□□ 0.1
TRIM38O00635 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.68■□□□□ 0.1
TRIM38O00635 AC022210.1-201ENST00000449856 793 ntBASIC15.68■□□□□ 0.1
TRIM38O00635 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM38O00635 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM38O00635 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.68■□□□□ 0.1
TRIM38O00635 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC15.68■□□□□ 0.1
TRIM38O00635 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC15.68■□□□□ 0.1
TRIM38O00635 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.68■□□□□ 0.1
TRIM38O00635 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.68■□□□□ 0.1
TRIM38O00635 NAA38-206ENST00000576384 424 ntTSL 2 BASIC15.68■□□□□ 0.1
TRIM38O00635 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TRIM38O00635 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.68■□□□□ 0.1
TRIM38O00635 AC074044.1-201ENST00000609673 707 ntBASIC15.68■□□□□ 0.1
TRIM38O00635 WFDC1-204ENST00000613603 549 ntBASIC15.68■□□□□ 0.1
TRIM38O00635 MIR6799-201ENST00000620297 69 ntBASIC15.68■□□□□ 0.1
TRIM38O00635 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM38O00635 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM38O00635 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM38O00635 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
TRIM38O00635 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM38O00635 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM38O00635 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM38O00635 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.68■□□□□ 0.1
TRIM38O00635 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.68■□□□□ 0.1
TRIM38O00635 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM38O00635 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
TRIM38O00635 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TRIM38O00635 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.68■□□□□ 0.1
TRIM38O00635 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM38O00635 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
TRIM38O00635 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM38O00635 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.67■□□□□ 0.1
TRIM38O00635 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM38O00635 AL009178.2-201ENST00000597278 2719 ntBASIC15.67■□□□□ 0.1
TRIM38O00635 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM38O00635 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM38O00635 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM38O00635 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM38O00635 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM38O00635 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM38O00635 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM38O00635 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM38O00635 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM38O00635 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM38O00635 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.67■□□□□ 0.1
TRIM38O00635 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
TRIM38O00635 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
TRIM38O00635 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM38O00635 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
TRIM38O00635 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.67■□□□□ 0.1
TRIM38O00635 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.67■□□□□ 0.1
TRIM38O00635 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC15.67■□□□□ 0.1
TRIM38O00635 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
TRIM38O00635 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TRIM38O00635 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC15.67■□□□□ 0.1
TRIM38O00635 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.67■□□□□ 0.1
TRIM38O00635 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC15.67■□□□□ 0.1
TRIM38O00635 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.67■□□□□ 0.1
TRIM38O00635 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15.67■□□□□ 0.1
TRIM38O00635 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms