Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC16.24■□□□□ 0.19
SOX1O00570 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SOX1O00570 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SOX1O00570 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.24■□□□□ 0.19
SOX1O00570 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
SOX1O00570 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SOX1O00570 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SOX1O00570 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SOX1O00570 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
SOX1O00570 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SOX1O00570 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SOX1O00570 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SOX1O00570 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
SOX1O00570 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.23■□□□□ 0.19
SOX1O00570 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
SOX1O00570 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.23■□□□□ 0.19
SOX1O00570 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
SOX1O00570 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SOX1O00570 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SOX1O00570 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SOX1O00570 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
SOX1O00570 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SOX1O00570 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
SOX1O00570 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC16.23■□□□□ 0.19
SOX1O00570 KLF2P1-201ENST00000447438 1042 ntBASIC16.23■□□□□ 0.19
SOX1O00570 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC16.23■□□□□ 0.19
SOX1O00570 MRPL22P1-201ENST00000505398 616 ntBASIC16.23■□□□□ 0.19
SOX1O00570 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.23■□□□□ 0.19
SOX1O00570 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SOX1O00570 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC16.23■□□□□ 0.19
SOX1O00570 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC16.23■□□□□ 0.19
SOX1O00570 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
SOX1O00570 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC16.23■□□□□ 0.19
SOX1O00570 SIGLEC18P-201ENST00000602271 909 ntBASIC16.23■□□□□ 0.19
SOX1O00570 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC16.23■□□□□ 0.19
SOX1O00570 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC16.23■□□□□ 0.19
SOX1O00570 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC16.23■□□□□ 0.19
SOX1O00570 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SOX1O00570 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SOX1O00570 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.23■□□□□ 0.19
SOX1O00570 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SOX1O00570 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.23■□□□□ 0.19
SOX1O00570 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SOX1O00570 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SOX1O00570 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.23■□□□□ 0.19
SOX1O00570 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SOX1O00570 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.22■□□□□ 0.19
SOX1O00570 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.22■□□□□ 0.19
SOX1O00570 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SOX1O00570 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC16.22■□□□□ 0.19
SOX1O00570 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SOX1O00570 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
SOX1O00570 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SOX1O00570 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.22■□□□□ 0.19
SOX1O00570 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SOX1O00570 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.22■□□□□ 0.19
SOX1O00570 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.22■□□□□ 0.19
SOX1O00570 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SOX1O00570 AC067852.2-201ENST00000590513 2313 ntBASIC16.22■□□□□ 0.19
SOX1O00570 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SOX1O00570 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SOX1O00570 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
SOX1O00570 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SOX1O00570 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SOX1O00570 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
SOX1O00570 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SOX1O00570 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC16.22■□□□□ 0.19
SOX1O00570 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SOX1O00570 AC092638.2-201ENST00000441105 947 ntBASIC16.22■□□□□ 0.19
SOX1O00570 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC16.22■□□□□ 0.19
SOX1O00570 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC16.22■□□□□ 0.19
SOX1O00570 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC16.22■□□□□ 0.19
SOX1O00570 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SOX1O00570 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC16.22■□□□□ 0.19
SOX1O00570 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC16.22■□□□□ 0.19
SOX1O00570 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
SOX1O00570 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC16.22■□□□□ 0.19
SOX1O00570 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SOX1O00570 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
SOX1O00570 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SOX1O00570 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SOX1O00570 FAM90A21P-201ENST00000510875 1396 ntBASIC16.22■□□□□ 0.19
SOX1O00570 FAM90A15P-201ENST00000514465 1395 ntBASIC16.22■□□□□ 0.19
SOX1O00570 FAM90A6P-201ENST00000515148 1394 ntBASIC16.22■□□□□ 0.19
SOX1O00570 FAM90A16P-201ENST00000526662 1395 ntBASIC16.22■□□□□ 0.19
SOX1O00570 FAM90A9P-201ENST00000527940 1395 ntBASIC16.22■□□□□ 0.19
SOX1O00570 FAM90A5P-201ENST00000528738 1395 ntBASIC16.22■□□□□ 0.19
SOX1O00570 FAM90A14P-201ENST00000530386 1395 ntBASIC16.22■□□□□ 0.19
SOX1O00570 FAM90A13P-201ENST00000534703 1395 ntBASIC16.22■□□□□ 0.19
SOX1O00570 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SOX1O00570 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SOX1O00570 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SOX1O00570 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SOX1O00570 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SOX1O00570 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.21■□□□□ 0.19
SOX1O00570 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SOX1O00570 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SOX1O00570 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SOX1O00570 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SOX1O00570 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms