Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.62■□□□□ 0.25
FOXN3O00409 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
FOXN3O00409 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
FOXN3O00409 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
FOXN3O00409 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
FOXN3O00409 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.62■□□□□ 0.25
FOXN3O00409 FAM8A3P-201ENST00000427218 844 ntBASIC16.62■□□□□ 0.25
FOXN3O00409 GHSR-202ENST00000427970 912 ntBASIC16.62■□□□□ 0.25
FOXN3O00409 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.62■□□□□ 0.25
FOXN3O00409 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
FOXN3O00409 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.62■□□□□ 0.25
FOXN3O00409 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.62■□□□□ 0.25
FOXN3O00409 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.62■□□□□ 0.25
FOXN3O00409 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.62■□□□□ 0.25
FOXN3O00409 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.62■□□□□ 0.25
FOXN3O00409 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
FOXN3O00409 AJ011931.1-201ENST00000618749 2492 ntBASIC16.62■□□□□ 0.25
FOXN3O00409 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
FOXN3O00409 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
FOXN3O00409 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
FOXN3O00409 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.62■□□□□ 0.25
FOXN3O00409 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
FOXN3O00409 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
FOXN3O00409 WASH3P-207ENST00000560956 1394 ntBASIC16.62■□□□□ 0.25
FOXN3O00409 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
FOXN3O00409 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
FOXN3O00409 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
FOXN3O00409 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
FOXN3O00409 CICP23-201ENST00000605013 2741 ntBASIC16.61■□□□□ 0.25
FOXN3O00409 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.61■□□□□ 0.25
FOXN3O00409 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
FOXN3O00409 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FOXN3O00409 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.61■□□□□ 0.25
FOXN3O00409 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FOXN3O00409 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
FOXN3O00409 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
FOXN3O00409 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FOXN3O00409 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FOXN3O00409 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.61■□□□□ 0.25
FOXN3O00409 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.61■□□□□ 0.25
FOXN3O00409 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
FOXN3O00409 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC16.61■□□□□ 0.25
FOXN3O00409 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.61■□□□□ 0.25
FOXN3O00409 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.61■□□□□ 0.25
FOXN3O00409 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.61■□□□□ 0.25
FOXN3O00409 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.61■□□□□ 0.25
FOXN3O00409 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
FOXN3O00409 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FOXN3O00409 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.61■□□□□ 0.25
FOXN3O00409 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.61■□□□□ 0.25
FOXN3O00409 AC000095.1-201ENST00000603208 874 ntBASIC16.61■□□□□ 0.25
FOXN3O00409 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
FOXN3O00409 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.61■□□□□ 0.25
FOXN3O00409 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.61■□□□□ 0.25
FOXN3O00409 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
FOXN3O00409 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
FOXN3O00409 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
FOXN3O00409 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
FOXN3O00409 REXO1L2P-201ENST00000425429 2069 ntBASIC16.61■□□□□ 0.25
FOXN3O00409 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FOXN3O00409 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FOXN3O00409 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
FOXN3O00409 AC068418.2-201ENST00000577309 3703 ntBASIC16.61■□□□□ 0.25
FOXN3O00409 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
FOXN3O00409 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
FOXN3O00409 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC16.61■□□□□ 0.25
FOXN3O00409 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FOXN3O00409 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
FOXN3O00409 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FOXN3O00409 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
FOXN3O00409 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
FOXN3O00409 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FOXN3O00409 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC16.61■□□□□ 0.25
FOXN3O00409 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.61■□□□□ 0.25
FOXN3O00409 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FOXN3O00409 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
FOXN3O00409 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.61■□□□□ 0.25
FOXN3O00409 AL359258.3-201ENST00000622910 2331 ntBASIC16.61■□□□□ 0.25
FOXN3O00409 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FOXN3O00409 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
FOXN3O00409 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FOXN3O00409 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FOXN3O00409 AC022144.1-201ENST00000602255 1580 ntBASIC16.6■□□□□ 0.25
FOXN3O00409 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.6■□□□□ 0.25
FOXN3O00409 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
FOXN3O00409 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FOXN3O00409 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
FOXN3O00409 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
FOXN3O00409 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.6■□□□□ 0.25
FOXN3O00409 MRPS18AP1-201ENST00000414458 589 ntBASIC16.6■□□□□ 0.25
FOXN3O00409 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.6■□□□□ 0.25
FOXN3O00409 AC092183.1-201ENST00000469884 875 ntBASIC16.6■□□□□ 0.25
FOXN3O00409 MEIS3P1-201ENST00000495167 958 ntBASIC16.6■□□□□ 0.25
FOXN3O00409 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.6■□□□□ 0.25
FOXN3O00409 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
FOXN3O00409 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.6■□□□□ 0.25
FOXN3O00409 AC135586.1-201ENST00000539323 574 ntBASIC16.6■□□□□ 0.25
FOXN3O00409 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.6■□□□□ 0.25
FOXN3O00409 SRD5A3P1-201ENST00000603021 949 ntBASIC16.6■□□□□ 0.25
FOXN3O00409 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms