Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SRRM3A6NNA2 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.16■□□□□ 0.18
SRRM3A6NNA2 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SRRM3A6NNA2 AL353732.1-201ENST00000569618 1459 ntBASIC16.16■□□□□ 0.18
SRRM3A6NNA2 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SRRM3A6NNA2 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
SRRM3A6NNA2 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SRRM3A6NNA2 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SRRM3A6NNA2 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SRRM3A6NNA2 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SRRM3A6NNA2 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.16■□□□□ 0.18
SRRM3A6NNA2 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SRRM3A6NNA2 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SRRM3A6NNA2 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.16■□□□□ 0.18
SRRM3A6NNA2 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SRRM3A6NNA2 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SRRM3A6NNA2 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SRRM3A6NNA2 AC098614.1-201ENST00000368528 745 ntBASIC16.16■□□□□ 0.18
SRRM3A6NNA2 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SRRM3A6NNA2 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SRRM3A6NNA2 AC140658.5-201ENST00000438532 169 ntBASIC16.16■□□□□ 0.18
SRRM3A6NNA2 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SRRM3A6NNA2 IGHV3-62-201ENST00000520057 340 ntBASIC16.16■□□□□ 0.18
SRRM3A6NNA2 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.16■□□□□ 0.18
SRRM3A6NNA2 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
SRRM3A6NNA2 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC16.16■□□□□ 0.18
SRRM3A6NNA2 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SRRM3A6NNA2 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC16.16■□□□□ 0.18
SRRM3A6NNA2 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SRRM3A6NNA2 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC16.16■□□□□ 0.18
SRRM3A6NNA2 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SRRM3A6NNA2 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SRRM3A6NNA2 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SRRM3A6NNA2 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SRRM3A6NNA2 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.16■□□□□ 0.18
SRRM3A6NNA2 AP003680.1-201ENST00000598970 3660 ntBASIC16.16■□□□□ 0.18
SRRM3A6NNA2 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
SRRM3A6NNA2 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SRRM3A6NNA2 AKAP8P1-201ENST00000434743 1349 ntBASIC16.16■□□□□ 0.18
SRRM3A6NNA2 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SRRM3A6NNA2 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.16■□□□□ 0.18
SRRM3A6NNA2 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
SRRM3A6NNA2 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SRRM3A6NNA2 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SRRM3A6NNA2 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC16.15■□□□□ 0.18
SRRM3A6NNA2 UXT-AS1-201ENST00000590504 1525 ntBASIC16.15■□□□□ 0.18
SRRM3A6NNA2 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SRRM3A6NNA2 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SRRM3A6NNA2 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC16.15■□□□□ 0.18
SRRM3A6NNA2 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC16.15■□□□□ 0.18
SRRM3A6NNA2 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SRRM3A6NNA2 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.15■□□□□ 0.18
SRRM3A6NNA2 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SRRM3A6NNA2 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.15■□□□□ 0.18
SRRM3A6NNA2 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SRRM3A6NNA2 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SRRM3A6NNA2 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SRRM3A6NNA2 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SRRM3A6NNA2 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC16.15■□□□□ 0.18
SRRM3A6NNA2 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
SRRM3A6NNA2 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.15■□□□□ 0.18
SRRM3A6NNA2 AC245100.5-201ENST00000452108 331 ntBASIC16.15■□□□□ 0.18
SRRM3A6NNA2 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.15■□□□□ 0.18
SRRM3A6NNA2 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC16.15■□□□□ 0.18
SRRM3A6NNA2 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SRRM3A6NNA2 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC16.15■□□□□ 0.18
SRRM3A6NNA2 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
SRRM3A6NNA2 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC16.15■□□□□ 0.18
SRRM3A6NNA2 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SRRM3A6NNA2 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.15■□□□□ 0.18
SRRM3A6NNA2 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.15■□□□□ 0.18
SRRM3A6NNA2 RETN-203ENST00000629642 400 ntTSL 5 BASIC16.15■□□□□ 0.18
SRRM3A6NNA2 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.15■□□□□ 0.18
SRRM3A6NNA2 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SRRM3A6NNA2 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SRRM3A6NNA2 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC16.15■□□□□ 0.18
SRRM3A6NNA2 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SRRM3A6NNA2 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SRRM3A6NNA2 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SRRM3A6NNA2 TKT-201ENST00000296289 1931 ntTSL 5 BASIC16.15■□□□□ 0.18
SRRM3A6NNA2 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.15■□□□□ 0.18
SRRM3A6NNA2 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
SRRM3A6NNA2 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SRRM3A6NNA2 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SRRM3A6NNA2 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.15■□□□□ 0.18
SRRM3A6NNA2 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SRRM3A6NNA2 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SRRM3A6NNA2 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC16.15■□□□□ 0.18
SRRM3A6NNA2 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SRRM3A6NNA2 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
SRRM3A6NNA2 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
SRRM3A6NNA2 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SRRM3A6NNA2 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SRRM3A6NNA2 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SRRM3A6NNA2 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SRRM3A6NNA2 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.14■□□□□ 0.17
SRRM3A6NNA2 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SRRM3A6NNA2 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SRRM3A6NNA2 AC022144.1-201ENST00000602255 1580 ntBASIC16.14■□□□□ 0.17
SRRM3A6NNA2 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms