Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TVP23AA6NH52 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC13.94□□□□□ -0.18
TVP23AA6NH52 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC13.94□□□□□ -0.18
TVP23AA6NH52 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC13.94□□□□□ -0.18
TVP23AA6NH52 AP000347.1-202ENST00000435868 847 ntBASIC13.94□□□□□ -0.18
TVP23AA6NH52 MTND6P24-201ENST00000440466 518 ntBASIC13.94□□□□□ -0.18
TVP23AA6NH52 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC13.94□□□□□ -0.18
TVP23AA6NH52 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.94□□□□□ -0.18
TVP23AA6NH52 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC13.94□□□□□ -0.18
TVP23AA6NH52 GATD1-206ENST00000526325 756 ntTSL 5 BASIC13.94□□□□□ -0.18
TVP23AA6NH52 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.94□□□□□ -0.18
TVP23AA6NH52 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.94□□□□□ -0.18
TVP23AA6NH52 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TVP23AA6NH52 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC13.94□□□□□ -0.18
TVP23AA6NH52 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC13.94□□□□□ -0.18
TVP23AA6NH52 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TVP23AA6NH52 HOTTIP_1.1-201ENST00000620415 57 ntBASIC13.94□□□□□ -0.18
TVP23AA6NH52 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
TVP23AA6NH52 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
TVP23AA6NH52 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.94□□□□□ -0.18
TVP23AA6NH52 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TVP23AA6NH52 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TVP23AA6NH52 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TVP23AA6NH52 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TVP23AA6NH52 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TVP23AA6NH52 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.94□□□□□ -0.18
TVP23AA6NH52 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TVP23AA6NH52 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.93□□□□□ -0.18
TVP23AA6NH52 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
TVP23AA6NH52 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TVP23AA6NH52 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.93□□□□□ -0.18
TVP23AA6NH52 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TVP23AA6NH52 CICP23-201ENST00000605013 2741 ntBASIC13.93□□□□□ -0.18
TVP23AA6NH52 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
TVP23AA6NH52 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TVP23AA6NH52 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TVP23AA6NH52 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.93□□□□□ -0.18
TVP23AA6NH52 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TVP23AA6NH52 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TVP23AA6NH52 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TVP23AA6NH52 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.93□□□□□ -0.18
TVP23AA6NH52 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
TVP23AA6NH52 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TVP23AA6NH52 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TVP23AA6NH52 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TVP23AA6NH52 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TVP23AA6NH52 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
TVP23AA6NH52 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TVP23AA6NH52 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
TVP23AA6NH52 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
TVP23AA6NH52 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.93□□□□□ -0.18
TVP23AA6NH52 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.93□□□□□ -0.18
TVP23AA6NH52 KLK8-202ENST00000320838 456 ntTSL 5 BASIC13.93□□□□□ -0.18
TVP23AA6NH52 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TVP23AA6NH52 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC13.93□□□□□ -0.18
TVP23AA6NH52 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC13.93□□□□□ -0.18
TVP23AA6NH52 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC13.93□□□□□ -0.18
TVP23AA6NH52 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC13.93□□□□□ -0.18
TVP23AA6NH52 GPS2P2-201ENST00000430745 888 ntBASIC13.93□□□□□ -0.18
TVP23AA6NH52 DNAJB3-201ENST00000446806 729 ntBASIC13.93□□□□□ -0.18
TVP23AA6NH52 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC13.93□□□□□ -0.18
TVP23AA6NH52 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.93□□□□□ -0.18
TVP23AA6NH52 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC13.93□□□□□ -0.18
TVP23AA6NH52 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC13.93□□□□□ -0.18
TVP23AA6NH52 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TVP23AA6NH52 AC010327.4-202ENST00000591484 748 ntBASIC13.93□□□□□ -0.18
TVP23AA6NH52 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TVP23AA6NH52 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC13.93□□□□□ -0.18
TVP23AA6NH52 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.93□□□□□ -0.18
TVP23AA6NH52 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.93□□□□□ -0.18
TVP23AA6NH52 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TVP23AA6NH52 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.93□□□□□ -0.18
TVP23AA6NH52 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TVP23AA6NH52 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
TVP23AA6NH52 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
TVP23AA6NH52 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TVP23AA6NH52 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TVP23AA6NH52 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TVP23AA6NH52 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
TVP23AA6NH52 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.93□□□□□ -0.18
TVP23AA6NH52 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.93□□□□□ -0.18
TVP23AA6NH52 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TVP23AA6NH52 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC13.93□□□□□ -0.18
TVP23AA6NH52 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.93□□□□□ -0.18
TVP23AA6NH52 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TVP23AA6NH52 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
TVP23AA6NH52 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TVP23AA6NH52 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TVP23AA6NH52 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TVP23AA6NH52 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TVP23AA6NH52 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TVP23AA6NH52 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TVP23AA6NH52 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TVP23AA6NH52 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.92□□□□□ -0.18
TVP23AA6NH52 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.92□□□□□ -0.18
TVP23AA6NH52 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
TVP23AA6NH52 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TVP23AA6NH52 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.92□□□□□ -0.18
TVP23AA6NH52 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TVP23AA6NH52 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms