Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRIT2A6NDA9 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRIT2A6NDA9 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.76□□□□□ -0.05
LRIT2A6NDA9 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRIT2A6NDA9 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRIT2A6NDA9 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRIT2A6NDA9 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LRIT2A6NDA9 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
LRIT2A6NDA9 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRIT2A6NDA9 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
LRIT2A6NDA9 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRIT2A6NDA9 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRIT2A6NDA9 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
LRIT2A6NDA9 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRIT2A6NDA9 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRIT2A6NDA9 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRIT2A6NDA9 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRIT2A6NDA9 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.75□□□□□ -0.05
LRIT2A6NDA9 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.75□□□□□ -0.05
LRIT2A6NDA9 AC087499.6-201ENST00000411576 835 ntBASIC14.75□□□□□ -0.05
LRIT2A6NDA9 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.75□□□□□ -0.05
LRIT2A6NDA9 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.75□□□□□ -0.05
LRIT2A6NDA9 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LRIT2A6NDA9 GAPDHP40-201ENST00000505218 1006 ntBASIC14.75□□□□□ -0.05
LRIT2A6NDA9 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
LRIT2A6NDA9 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.75□□□□□ -0.05
LRIT2A6NDA9 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.75□□□□□ -0.05
LRIT2A6NDA9 AL662799.1-202ENST00000614205 422 ntBASIC14.75□□□□□ -0.05
LRIT2A6NDA9 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
LRIT2A6NDA9 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LRIT2A6NDA9 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.75□□□□□ -0.05
LRIT2A6NDA9 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRIT2A6NDA9 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.75□□□□□ -0.05
LRIT2A6NDA9 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.75□□□□□ -0.05
LRIT2A6NDA9 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
LRIT2A6NDA9 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
LRIT2A6NDA9 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRIT2A6NDA9 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.75□□□□□ -0.05
LRIT2A6NDA9 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRIT2A6NDA9 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
LRIT2A6NDA9 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.75□□□□□ -0.05
LRIT2A6NDA9 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.75□□□□□ -0.05
LRIT2A6NDA9 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
LRIT2A6NDA9 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
LRIT2A6NDA9 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRIT2A6NDA9 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LRIT2A6NDA9 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRIT2A6NDA9 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
LRIT2A6NDA9 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRIT2A6NDA9 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
LRIT2A6NDA9 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRIT2A6NDA9 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRIT2A6NDA9 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRIT2A6NDA9 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.74□□□□□ -0.05
LRIT2A6NDA9 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.74□□□□□ -0.05
LRIT2A6NDA9 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRIT2A6NDA9 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRIT2A6NDA9 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRIT2A6NDA9 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRIT2A6NDA9 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRIT2A6NDA9 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LRIT2A6NDA9 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
LRIT2A6NDA9 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.74□□□□□ -0.05
LRIT2A6NDA9 PIN1P1-201ENST00000412108 996 ntBASIC14.74□□□□□ -0.05
LRIT2A6NDA9 GHSR-202ENST00000427970 912 ntBASIC14.74□□□□□ -0.05
LRIT2A6NDA9 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.74□□□□□ -0.05
LRIT2A6NDA9 TERF1P3-201ENST00000505638 1227 ntBASIC14.74□□□□□ -0.05
LRIT2A6NDA9 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.74□□□□□ -0.05
LRIT2A6NDA9 AC104596.2-201ENST00000512793 793 ntBASIC14.74□□□□□ -0.05
LRIT2A6NDA9 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.74□□□□□ -0.05
LRIT2A6NDA9 API5-211ENST00000534695 560 ntTSL 5 BASIC14.74□□□□□ -0.05
LRIT2A6NDA9 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.74□□□□□ -0.05
LRIT2A6NDA9 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
LRIT2A6NDA9 AL049840.4-201ENST00000602422 811 ntBASIC14.74□□□□□ -0.05
LRIT2A6NDA9 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.74□□□□□ -0.05
LRIT2A6NDA9 AC093726.1-201ENST00000608064 963 ntBASIC14.74□□□□□ -0.05
LRIT2A6NDA9 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.74□□□□□ -0.05
LRIT2A6NDA9 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.74□□□□□ -0.05
LRIT2A6NDA9 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.74□□□□□ -0.05
LRIT2A6NDA9 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.74□□□□□ -0.05
LRIT2A6NDA9 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.74□□□□□ -0.05
LRIT2A6NDA9 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.74□□□□□ -0.05
LRIT2A6NDA9 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LRIT2A6NDA9 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRIT2A6NDA9 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRIT2A6NDA9 AC091951.1-201ENST00000512854 2465 ntBASIC14.74□□□□□ -0.05
LRIT2A6NDA9 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRIT2A6NDA9 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRIT2A6NDA9 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LRIT2A6NDA9 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.74□□□□□ -0.05
LRIT2A6NDA9 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.74□□□□□ -0.05
LRIT2A6NDA9 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
LRIT2A6NDA9 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.74□□□□□ -0.05
LRIT2A6NDA9 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRIT2A6NDA9 DRD5P1-201ENST00000456605 1438 ntBASIC14.74□□□□□ -0.05
LRIT2A6NDA9 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LRIT2A6NDA9 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRIT2A6NDA9 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRIT2A6NDA9 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LRIT2A6NDA9 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms