Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC78A2IDD5 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC78A2IDD5 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CCDC78A2IDD5 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC78A2IDD5 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CCDC78A2IDD5 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
CCDC78A2IDD5 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.81■□□□□ 0.12
CCDC78A2IDD5 FO393414.2-201ENST00000405153 598 ntBASIC15.81■□□□□ 0.12
CCDC78A2IDD5 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.81■□□□□ 0.12
CCDC78A2IDD5 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.81■□□□□ 0.12
CCDC78A2IDD5 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.81■□□□□ 0.12
CCDC78A2IDD5 AC107890.1-201ENST00000422478 521 ntBASIC15.81■□□□□ 0.12
CCDC78A2IDD5 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC78A2IDD5 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC78A2IDD5 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC78A2IDD5 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC78A2IDD5 FAM86GP-201ENST00000448322 971 ntBASIC15.81■□□□□ 0.12
CCDC78A2IDD5 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC78A2IDD5 AC027369.6-201ENST00000525520 931 ntBASIC15.81■□□□□ 0.12
CCDC78A2IDD5 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC78A2IDD5 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC78A2IDD5 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.81■□□□□ 0.12
CCDC78A2IDD5 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CCDC78A2IDD5 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CCDC78A2IDD5 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC15.81■□□□□ 0.12
CCDC78A2IDD5 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.81■□□□□ 0.12
CCDC78A2IDD5 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.81■□□□□ 0.12
CCDC78A2IDD5 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC78A2IDD5 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC78A2IDD5 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.81■□□□□ 0.12
CCDC78A2IDD5 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.81■□□□□ 0.12
CCDC78A2IDD5 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC78A2IDD5 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC78A2IDD5 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC78A2IDD5 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.81■□□□□ 0.12
CCDC78A2IDD5 FO538757.1-201ENST00000623083 1397 ntBASIC15.81■□□□□ 0.12
CCDC78A2IDD5 AC073592.8-201ENST00000624126 511 ntBASIC15.81■□□□□ 0.12
CCDC78A2IDD5 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.81■□□□□ 0.12
CCDC78A2IDD5 AL033527.5-202ENST00000641632 1098 ntBASIC15.81■□□□□ 0.12
CCDC78A2IDD5 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC78A2IDD5 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC78A2IDD5 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC78A2IDD5 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC78A2IDD5 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC78A2IDD5 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.81■□□□□ 0.12
CCDC78A2IDD5 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC78A2IDD5 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC78A2IDD5 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC78A2IDD5 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC78A2IDD5 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC78A2IDD5 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC78A2IDD5 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC78A2IDD5 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC78A2IDD5 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC78A2IDD5 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC78A2IDD5 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.8■□□□□ 0.12
CCDC78A2IDD5 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC78A2IDD5 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CCDC78A2IDD5 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC78A2IDD5 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CCDC78A2IDD5 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC78A2IDD5 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.8■□□□□ 0.12
CCDC78A2IDD5 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC78A2IDD5 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.8■□□□□ 0.12
CCDC78A2IDD5 PON3-203ENST00000427422 894 ntTSL 3 BASIC15.8■□□□□ 0.12
CCDC78A2IDD5 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.8■□□□□ 0.12
CCDC78A2IDD5 AC069120.2-201ENST00000524091 540 ntBASIC15.8■□□□□ 0.12
CCDC78A2IDD5 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC78A2IDD5 DUX4L27-201ENST00000554796 1261 ntBASIC15.8■□□□□ 0.12
CCDC78A2IDD5 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CCDC78A2IDD5 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.8■□□□□ 0.12
CCDC78A2IDD5 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.8■□□□□ 0.12
CCDC78A2IDD5 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.8■□□□□ 0.12
CCDC78A2IDD5 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC78A2IDD5 MIR6069-201ENST00000620069 79 ntBASIC15.8■□□□□ 0.12
CCDC78A2IDD5 AF228730.6-201ENST00000641497 218 ntBASIC15.8■□□□□ 0.12
CCDC78A2IDD5 AC084121.3-201ENST00000641716 218 ntBASIC15.8■□□□□ 0.12
CCDC78A2IDD5 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC78A2IDD5 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC78A2IDD5 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC78A2IDD5 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC78A2IDD5 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC78A2IDD5 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC78A2IDD5 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC78A2IDD5 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CCDC78A2IDD5 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CCDC78A2IDD5 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC78A2IDD5 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.8■□□□□ 0.12
CCDC78A2IDD5 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC78A2IDD5 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.79■□□□□ 0.12
CCDC78A2IDD5 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
CCDC78A2IDD5 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC78A2IDD5 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC78A2IDD5 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC78A2IDD5 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC78A2IDD5 CICP11-201ENST00000434745 2827 ntBASIC15.79■□□□□ 0.12
CCDC78A2IDD5 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC15.79■□□□□ 0.12
CCDC78A2IDD5 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC78A2IDD5 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
CCDC78A2IDD5 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms