Protein–RNA interactions for Protein: Q9Y5H7

PCDHA5, Protocadherin alpha-5, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA5Q9Y5H7 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC26.02■■□□□ 1.76
PCDHA5Q9Y5H7 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC26.02■■□□□ 1.76
PCDHA5Q9Y5H7 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC26.02■■□□□ 1.76
PCDHA5Q9Y5H7 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PCDHA5Q9Y5H7 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PCDHA5Q9Y5H7 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
PCDHA5Q9Y5H7 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC26.01■■□□□ 1.75
PCDHA5Q9Y5H7 AC133561.1-201ENST00000568600 2415 ntBASIC26■■□□□ 1.75
PCDHA5Q9Y5H7 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC26■■□□□ 1.75
PCDHA5Q9Y5H7 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC26■■□□□ 1.75
PCDHA5Q9Y5H7 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
PCDHA5Q9Y5H7 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC26■■□□□ 1.75
PCDHA5Q9Y5H7 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC26■■□□□ 1.75
PCDHA5Q9Y5H7 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC26■■□□□ 1.75
PCDHA5Q9Y5H7 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PCDHA5Q9Y5H7 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
PCDHA5Q9Y5H7 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PCDHA5Q9Y5H7 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC25.99■■□□□ 1.75
PCDHA5Q9Y5H7 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC25.99■■□□□ 1.75
PCDHA5Q9Y5H7 HYI-213ENST00000583037 1322 ntTSL 5 BASIC25.99■■□□□ 1.75
PCDHA5Q9Y5H7 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
PCDHA5Q9Y5H7 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC25.99■■□□□ 1.75
PCDHA5Q9Y5H7 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC25.98■■□□□ 1.75
PCDHA5Q9Y5H7 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC25.98■■□□□ 1.75
PCDHA5Q9Y5H7 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC25.98■■□□□ 1.75
PCDHA5Q9Y5H7 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC25.98■■□□□ 1.75
PCDHA5Q9Y5H7 AC018755.3-202ENST00000596210 929 ntBASIC25.98■■□□□ 1.75
PCDHA5Q9Y5H7 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
PCDHA5Q9Y5H7 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
PCDHA5Q9Y5H7 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
PCDHA5Q9Y5H7 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC25.97■■□□□ 1.75
PCDHA5Q9Y5H7 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC25.97■■□□□ 1.75
PCDHA5Q9Y5H7 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC25.97■■□□□ 1.75
PCDHA5Q9Y5H7 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
PCDHA5Q9Y5H7 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
PCDHA5Q9Y5H7 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC25.97■■□□□ 1.75
PCDHA5Q9Y5H7 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC25.97■■□□□ 1.75
PCDHA5Q9Y5H7 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC25.97■■□□□ 1.75
PCDHA5Q9Y5H7 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC25.97■■□□□ 1.75
PCDHA5Q9Y5H7 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC25.97■■□□□ 1.75
PCDHA5Q9Y5H7 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC25.97■■□□□ 1.75
PCDHA5Q9Y5H7 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
PCDHA5Q9Y5H7 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC25.96■■□□□ 1.75
PCDHA5Q9Y5H7 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
PCDHA5Q9Y5H7 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
PCDHA5Q9Y5H7 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
PCDHA5Q9Y5H7 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
PCDHA5Q9Y5H7 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
PCDHA5Q9Y5H7 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC25.96■■□□□ 1.75
PCDHA5Q9Y5H7 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC25.96■■□□□ 1.75
PCDHA5Q9Y5H7 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC25.95■■□□□ 1.75
PCDHA5Q9Y5H7 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
PCDHA5Q9Y5H7 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC25.95■■□□□ 1.74
PCDHA5Q9Y5H7 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC25.95■■□□□ 1.74
PCDHA5Q9Y5H7 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC25.95■■□□□ 1.74
PCDHA5Q9Y5H7 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
PCDHA5Q9Y5H7 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
PCDHA5Q9Y5H7 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
PCDHA5Q9Y5H7 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC25.94■■□□□ 1.74
PCDHA5Q9Y5H7 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC25.94■■□□□ 1.74
PCDHA5Q9Y5H7 AC087393.1-201ENST00000582896 145 ntBASIC25.94■■□□□ 1.74
PCDHA5Q9Y5H7 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
PCDHA5Q9Y5H7 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC25.94■■□□□ 1.74
PCDHA5Q9Y5H7 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
PCDHA5Q9Y5H7 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
PCDHA5Q9Y5H7 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
PCDHA5Q9Y5H7 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC25.93■■□□□ 1.74
PCDHA5Q9Y5H7 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
PCDHA5Q9Y5H7 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC25.93■■□□□ 1.74
PCDHA5Q9Y5H7 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC25.93■■□□□ 1.74
PCDHA5Q9Y5H7 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC25.93■■□□□ 1.74
PCDHA5Q9Y5H7 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC25.92■■□□□ 1.74
PCDHA5Q9Y5H7 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC25.92■■□□□ 1.74
PCDHA5Q9Y5H7 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC25.92■■□□□ 1.74
PCDHA5Q9Y5H7 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC25.92■■□□□ 1.74
PCDHA5Q9Y5H7 IDNK-203ENST00000405990 629 ntTSL 2 BASIC25.92■■□□□ 1.74
PCDHA5Q9Y5H7 DUX4L9-201ENST00000449051 1259 ntBASIC25.92■■□□□ 1.74
PCDHA5Q9Y5H7 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC25.92■■□□□ 1.74
PCDHA5Q9Y5H7 DUSP8P5-201ENST00000422884 1815 ntBASIC25.92■■□□□ 1.74
PCDHA5Q9Y5H7 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC25.92■■□□□ 1.74
PCDHA5Q9Y5H7 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC25.92■■□□□ 1.74
PCDHA5Q9Y5H7 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC25.92■■□□□ 1.74
PCDHA5Q9Y5H7 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC25.92■■□□□ 1.74
PCDHA5Q9Y5H7 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
PCDHA5Q9Y5H7 AC090877.2-201ENST00000558441 1738 ntBASIC25.91■■□□□ 1.74
PCDHA5Q9Y5H7 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
PCDHA5Q9Y5H7 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
PCDHA5Q9Y5H7 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC25.91■■□□□ 1.74
PCDHA5Q9Y5H7 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC25.91■■□□□ 1.74
PCDHA5Q9Y5H7 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
PCDHA5Q9Y5H7 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
PCDHA5Q9Y5H7 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
PCDHA5Q9Y5H7 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PCDHA5Q9Y5H7 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PCDHA5Q9Y5H7 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
PCDHA5Q9Y5H7 MIR6765-201ENST00000614092 87 ntBASIC25.9■■□□□ 1.74
PCDHA5Q9Y5H7 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC25.9■■□□□ 1.74
PCDHA5Q9Y5H7 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
PCDHA5Q9Y5H7 AC068473.5-201ENST00000616428 2072 ntBASIC25.89■■□□□ 1.74
PCDHA5Q9Y5H7 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC25.89■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms