Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC29.72■■■□□ 2.35
RTCBQ9Y3I0 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
RTCBQ9Y3I0 AC097381.1-201ENST00000429019 1296 ntBASIC29.71■■■□□ 2.35
RTCBQ9Y3I0 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC29.71■■■□□ 2.35
RTCBQ9Y3I0 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC29.71■■■□□ 2.35
RTCBQ9Y3I0 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
RTCBQ9Y3I0 AC005703.6-201ENST00000623265 1329 ntBASIC29.71■■■□□ 2.35
RTCBQ9Y3I0 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC29.7■■■□□ 2.35
RTCBQ9Y3I0 SYT6-210ENST00000641643 1587 ntBASIC29.7■■■□□ 2.35
RTCBQ9Y3I0 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC29.7■■■□□ 2.35
RTCBQ9Y3I0 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
RTCBQ9Y3I0 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
RTCBQ9Y3I0 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
RTCBQ9Y3I0 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC29.69■■■□□ 2.34
RTCBQ9Y3I0 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
RTCBQ9Y3I0 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC29.69■■■□□ 2.34
RTCBQ9Y3I0 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
RTCBQ9Y3I0 MIR4767-201ENST00000582827 78 ntBASIC29.68■■■□□ 2.34
RTCBQ9Y3I0 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
RTCBQ9Y3I0 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
RTCBQ9Y3I0 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
RTCBQ9Y3I0 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
RTCBQ9Y3I0 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
RTCBQ9Y3I0 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
RTCBQ9Y3I0 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC29.67■■■□□ 2.34
RTCBQ9Y3I0 AC092171.4-201ENST00000609130 632 ntBASIC29.67■■■□□ 2.34
RTCBQ9Y3I0 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC29.67■■■□□ 2.34
RTCBQ9Y3I0 AC097639.1-201ENST00000565519 1891 ntBASIC29.66■■■□□ 2.34
RTCBQ9Y3I0 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC29.66■■■□□ 2.34
RTCBQ9Y3I0 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC29.66■■■□□ 2.34
RTCBQ9Y3I0 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC29.66■■■□□ 2.34
RTCBQ9Y3I0 AC142086.6-201ENST00000621154 1765 ntBASIC29.65■■■□□ 2.34
RTCBQ9Y3I0 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
RTCBQ9Y3I0 AC087623.3-201ENST00000607047 1098 ntBASIC29.65■■■□□ 2.34
RTCBQ9Y3I0 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC29.64■■■□□ 2.34
RTCBQ9Y3I0 MAG-206ENST00000597035 542 ntTSL 4 BASIC29.64■■■□□ 2.34
RTCBQ9Y3I0 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC29.64■■■□□ 2.34
RTCBQ9Y3I0 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC29.63■■■□□ 2.33
RTCBQ9Y3I0 PTMA-205ENST00000410064 814 ntTSL 2 BASIC29.63■■■□□ 2.33
RTCBQ9Y3I0 CA15P2-201ENST00000611168 834 ntBASIC29.63■■■□□ 2.33
RTCBQ9Y3I0 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC29.63■■■□□ 2.33
RTCBQ9Y3I0 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC29.63■■■□□ 2.33
RTCBQ9Y3I0 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC29.63■■■□□ 2.33
RTCBQ9Y3I0 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
RTCBQ9Y3I0 RASA4CP-201ENST00000424092 1398 ntBASIC29.63■■■□□ 2.33
RTCBQ9Y3I0 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC29.62■■■□□ 2.33
RTCBQ9Y3I0 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
RTCBQ9Y3I0 AL162430.1-201ENST00000480705 870 ntBASIC29.62■■■□□ 2.33
RTCBQ9Y3I0 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC29.62■■■□□ 2.33
RTCBQ9Y3I0 PLD4-205ENST00000553861 667 ntTSL 2 BASIC29.62■■■□□ 2.33
RTCBQ9Y3I0 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC29.62■■■□□ 2.33
RTCBQ9Y3I0 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC29.61■■■□□ 2.33
RTCBQ9Y3I0 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
RTCBQ9Y3I0 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
RTCBQ9Y3I0 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC29.61■■■□□ 2.33
RTCBQ9Y3I0 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC29.61■■■□□ 2.33
RTCBQ9Y3I0 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC29.61■■■□□ 2.33
RTCBQ9Y3I0 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
RTCBQ9Y3I0 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC29.61■■■□□ 2.33
RTCBQ9Y3I0 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC29.61■■■□□ 2.33
RTCBQ9Y3I0 AC096887.2-201ENST00000623443 1957 ntBASIC29.61■■■□□ 2.33
RTCBQ9Y3I0 SERBP1P1-201ENST00000396021 1160 ntBASIC29.6■■■□□ 2.33
RTCBQ9Y3I0 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC29.6■■■□□ 2.33
RTCBQ9Y3I0 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
RTCBQ9Y3I0 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
RTCBQ9Y3I0 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
RTCBQ9Y3I0 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
RTCBQ9Y3I0 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC29.59■■■□□ 2.33
RTCBQ9Y3I0 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
RTCBQ9Y3I0 GLI3-203ENST00000437480 451 ntTSL 2 BASIC29.59■■■□□ 2.33
RTCBQ9Y3I0 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
RTCBQ9Y3I0 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC29.59■■■□□ 2.33
RTCBQ9Y3I0 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC29.58■■■□□ 2.33
RTCBQ9Y3I0 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
RTCBQ9Y3I0 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC29.57■■■□□ 2.32
RTCBQ9Y3I0 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
RTCBQ9Y3I0 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
RTCBQ9Y3I0 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC29.57■■■□□ 2.32
RTCBQ9Y3I0 AC027682.1-201ENST00000562846 899 ntBASIC29.57■■■□□ 2.32
RTCBQ9Y3I0 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC29.57■■■□□ 2.32
RTCBQ9Y3I0 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
RTCBQ9Y3I0 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
RTCBQ9Y3I0 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC29.56■■■□□ 2.32
RTCBQ9Y3I0 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC29.56■■■□□ 2.32
RTCBQ9Y3I0 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
RTCBQ9Y3I0 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
RTCBQ9Y3I0 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
RTCBQ9Y3I0 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
RTCBQ9Y3I0 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC29.56■■■□□ 2.32
RTCBQ9Y3I0 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
RTCBQ9Y3I0 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
RTCBQ9Y3I0 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC29.55■■■□□ 2.32
RTCBQ9Y3I0 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC29.55■■■□□ 2.32
RTCBQ9Y3I0 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC29.55■■■□□ 2.32
RTCBQ9Y3I0 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC29.55■■■□□ 2.32
RTCBQ9Y3I0 REST-206ENST00000612429 1376 ntTSL 5 BASIC29.55■■■□□ 2.32
RTCBQ9Y3I0 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC29.55■■■□□ 2.32
RTCBQ9Y3I0 REST-207ENST00000616975 1370 ntTSL 5 BASIC29.55■■■□□ 2.32
RTCBQ9Y3I0 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
RTCBQ9Y3I0 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms