Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC22■■□□□ 1.11
LRCH1Q9Y2L9 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC22■■□□□ 1.11
LRCH1Q9Y2L9 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC22■■□□□ 1.11
LRCH1Q9Y2L9 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC22■■□□□ 1.11
LRCH1Q9Y2L9 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
LRCH1Q9Y2L9 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
LRCH1Q9Y2L9 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
LRCH1Q9Y2L9 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC22■■□□□ 1.11
LRCH1Q9Y2L9 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC22■■□□□ 1.11
LRCH1Q9Y2L9 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
LRCH1Q9Y2L9 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC22■■□□□ 1.11
LRCH1Q9Y2L9 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
LRCH1Q9Y2L9 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
LRCH1Q9Y2L9 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
LRCH1Q9Y2L9 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.99■■□□□ 1.11
LRCH1Q9Y2L9 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.99■■□□□ 1.11
LRCH1Q9Y2L9 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
LRCH1Q9Y2L9 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.98■■□□□ 1.11
LRCH1Q9Y2L9 ECEL1P1-201ENST00000373592 1742 ntBASIC21.98■■□□□ 1.11
LRCH1Q9Y2L9 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.98■■□□□ 1.11
LRCH1Q9Y2L9 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC21.98■■□□□ 1.11
LRCH1Q9Y2L9 ABHD17AP4-201ENST00000411545 909 ntBASIC21.98■■□□□ 1.11
LRCH1Q9Y2L9 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
LRCH1Q9Y2L9 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.98■■□□□ 1.11
LRCH1Q9Y2L9 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC21.98■■□□□ 1.11
LRCH1Q9Y2L9 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.98■■□□□ 1.11
LRCH1Q9Y2L9 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
LRCH1Q9Y2L9 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
LRCH1Q9Y2L9 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
LRCH1Q9Y2L9 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LRCH1Q9Y2L9 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
LRCH1Q9Y2L9 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
LRCH1Q9Y2L9 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
LRCH1Q9Y2L9 CIB2-204ENST00000557846 934 ntTSL 3 BASIC21.97■■□□□ 1.11
LRCH1Q9Y2L9 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC21.97■■□□□ 1.11
LRCH1Q9Y2L9 AL137060.1-201ENST00000618151 2648 ntBASIC21.97■■□□□ 1.11
LRCH1Q9Y2L9 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.97■■□□□ 1.11
LRCH1Q9Y2L9 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
LRCH1Q9Y2L9 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
LRCH1Q9Y2L9 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
LRCH1Q9Y2L9 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
LRCH1Q9Y2L9 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.96■■□□□ 1.11
LRCH1Q9Y2L9 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
LRCH1Q9Y2L9 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
LRCH1Q9Y2L9 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
LRCH1Q9Y2L9 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
LRCH1Q9Y2L9 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
LRCH1Q9Y2L9 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
LRCH1Q9Y2L9 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.95■■□□□ 1.11
LRCH1Q9Y2L9 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
LRCH1Q9Y2L9 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
LRCH1Q9Y2L9 DUX4L29-201ENST00000425409 679 ntBASIC21.95■■□□□ 1.1
LRCH1Q9Y2L9 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
LRCH1Q9Y2L9 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
LRCH1Q9Y2L9 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
LRCH1Q9Y2L9 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
LRCH1Q9Y2L9 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LRCH1Q9Y2L9 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LRCH1Q9Y2L9 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
LRCH1Q9Y2L9 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
LRCH1Q9Y2L9 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.94■■□□□ 1.1
LRCH1Q9Y2L9 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LRCH1Q9Y2L9 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LRCH1Q9Y2L9 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
LRCH1Q9Y2L9 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
LRCH1Q9Y2L9 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
LRCH1Q9Y2L9 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LRCH1Q9Y2L9 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.94■■□□□ 1.1
LRCH1Q9Y2L9 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.94■■□□□ 1.1
LRCH1Q9Y2L9 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LRCH1Q9Y2L9 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LRCH1Q9Y2L9 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.94■■□□□ 1.1
LRCH1Q9Y2L9 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
LRCH1Q9Y2L9 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
LRCH1Q9Y2L9 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.93■■□□□ 1.1
LRCH1Q9Y2L9 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LRCH1Q9Y2L9 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
LRCH1Q9Y2L9 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.93■■□□□ 1.1
LRCH1Q9Y2L9 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
LRCH1Q9Y2L9 MIR6090-201ENST00000622481 60 ntBASIC21.93■■□□□ 1.1
LRCH1Q9Y2L9 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
LRCH1Q9Y2L9 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LRCH1Q9Y2L9 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LRCH1Q9Y2L9 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.92■■□□□ 1.1
LRCH1Q9Y2L9 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LRCH1Q9Y2L9 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LRCH1Q9Y2L9 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
LRCH1Q9Y2L9 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.92■■□□□ 1.1
LRCH1Q9Y2L9 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.92■■□□□ 1.1
LRCH1Q9Y2L9 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
LRCH1Q9Y2L9 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.91■■□□□ 1.1
LRCH1Q9Y2L9 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.91■■□□□ 1.1
LRCH1Q9Y2L9 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC21.91■■□□□ 1.1
LRCH1Q9Y2L9 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LRCH1Q9Y2L9 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LRCH1Q9Y2L9 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LRCH1Q9Y2L9 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
LRCH1Q9Y2L9 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.91■■□□□ 1.1
LRCH1Q9Y2L9 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.91■■□□□ 1.1
LRCH1Q9Y2L9 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms