Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
COPS3Q9UNS2 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.63■□□□□ 0.89
COPS3Q9UNS2 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
COPS3Q9UNS2 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
COPS3Q9UNS2 DUSP8P5-201ENST00000422884 1815 ntBASIC20.63■□□□□ 0.89
COPS3Q9UNS2 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COPS3Q9UNS2 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COPS3Q9UNS2 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COPS3Q9UNS2 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COPS3Q9UNS2 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COPS3Q9UNS2 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
COPS3Q9UNS2 AC012676.1-201ENST00000574705 1949 ntBASIC20.62■□□□□ 0.89
COPS3Q9UNS2 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
COPS3Q9UNS2 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.61■□□□□ 0.89
COPS3Q9UNS2 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
COPS3Q9UNS2 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COPS3Q9UNS2 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.61■□□□□ 0.89
COPS3Q9UNS2 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
COPS3Q9UNS2 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COPS3Q9UNS2 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.61■□□□□ 0.89
COPS3Q9UNS2 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COPS3Q9UNS2 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COPS3Q9UNS2 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.61■□□□□ 0.89
COPS3Q9UNS2 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
COPS3Q9UNS2 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COPS3Q9UNS2 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COPS3Q9UNS2 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
COPS3Q9UNS2 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.6■□□□□ 0.89
COPS3Q9UNS2 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.6■□□□□ 0.89
COPS3Q9UNS2 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COPS3Q9UNS2 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
COPS3Q9UNS2 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
COPS3Q9UNS2 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
COPS3Q9UNS2 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
COPS3Q9UNS2 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
COPS3Q9UNS2 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COPS3Q9UNS2 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COPS3Q9UNS2 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COPS3Q9UNS2 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
COPS3Q9UNS2 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
COPS3Q9UNS2 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
COPS3Q9UNS2 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
COPS3Q9UNS2 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.58■□□□□ 0.89
COPS3Q9UNS2 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
COPS3Q9UNS2 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC20.58■□□□□ 0.89
COPS3Q9UNS2 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
COPS3Q9UNS2 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
COPS3Q9UNS2 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
COPS3Q9UNS2 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.57■□□□□ 0.88
COPS3Q9UNS2 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COPS3Q9UNS2 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
COPS3Q9UNS2 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
COPS3Q9UNS2 GPX1-201ENST00000419349 1106 ntBASIC20.57■□□□□ 0.88
COPS3Q9UNS2 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
COPS3Q9UNS2 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
COPS3Q9UNS2 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.57■□□□□ 0.88
COPS3Q9UNS2 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
COPS3Q9UNS2 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.56■□□□□ 0.88
COPS3Q9UNS2 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COPS3Q9UNS2 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COPS3Q9UNS2 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COPS3Q9UNS2 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
COPS3Q9UNS2 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COPS3Q9UNS2 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
COPS3Q9UNS2 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
COPS3Q9UNS2 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.55■□□□□ 0.88
COPS3Q9UNS2 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
COPS3Q9UNS2 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
COPS3Q9UNS2 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COPS3Q9UNS2 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COPS3Q9UNS2 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
COPS3Q9UNS2 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COPS3Q9UNS2 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
COPS3Q9UNS2 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
COPS3Q9UNS2 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
COPS3Q9UNS2 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COPS3Q9UNS2 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
COPS3Q9UNS2 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
COPS3Q9UNS2 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COPS3Q9UNS2 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COPS3Q9UNS2 KRT18P10-201ENST00000388836 1287 ntBASIC20.54■□□□□ 0.88
COPS3Q9UNS2 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.54■□□□□ 0.88
COPS3Q9UNS2 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COPS3Q9UNS2 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
COPS3Q9UNS2 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
COPS3Q9UNS2 AC009831.1-201ENST00000580420 1582 ntBASIC20.54■□□□□ 0.88
COPS3Q9UNS2 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COPS3Q9UNS2 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COPS3Q9UNS2 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
COPS3Q9UNS2 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COPS3Q9UNS2 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.53■□□□□ 0.88
COPS3Q9UNS2 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
COPS3Q9UNS2 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COPS3Q9UNS2 MIR4449-201ENST00000578365 66 ntBASIC20.53■□□□□ 0.88
COPS3Q9UNS2 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COPS3Q9UNS2 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.53■□□□□ 0.88
COPS3Q9UNS2 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.53■□□□□ 0.88
COPS3Q9UNS2 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COPS3Q9UNS2 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COPS3Q9UNS2 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms