Protein–RNA interactions for Protein: Q9UBC9

SPRR3, Small proline-rich protein 3, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPRR3Q9UBC9 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SPRR3Q9UBC9 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.89■□□□□ 0.94
SPRR3Q9UBC9 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
SPRR3Q9UBC9 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.89■□□□□ 0.93
SPRR3Q9UBC9 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SPRR3Q9UBC9 AL356740.2-201ENST00000601559 647 ntBASIC20.89■□□□□ 0.93
SPRR3Q9UBC9 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.89■□□□□ 0.93
SPRR3Q9UBC9 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SPRR3Q9UBC9 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SPRR3Q9UBC9 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.89■□□□□ 0.93
SPRR3Q9UBC9 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.88■□□□□ 0.93
SPRR3Q9UBC9 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.88■□□□□ 0.93
SPRR3Q9UBC9 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
SPRR3Q9UBC9 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.88■□□□□ 0.93
SPRR3Q9UBC9 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
SPRR3Q9UBC9 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SPRR3Q9UBC9 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.88■□□□□ 0.93
SPRR3Q9UBC9 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.88■□□□□ 0.93
SPRR3Q9UBC9 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.88■□□□□ 0.93
SPRR3Q9UBC9 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SPRR3Q9UBC9 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SPRR3Q9UBC9 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
SPRR3Q9UBC9 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.88■□□□□ 0.93
SPRR3Q9UBC9 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SPRR3Q9UBC9 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.87■□□□□ 0.93
SPRR3Q9UBC9 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.87■□□□□ 0.93
SPRR3Q9UBC9 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SPRR3Q9UBC9 MIR6089-201ENST00000616698 64 ntBASIC20.87■□□□□ 0.93
SPRR3Q9UBC9 MIR6722-201ENST00000617286 78 ntBASIC20.87■□□□□ 0.93
SPRR3Q9UBC9 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.87■□□□□ 0.93
SPRR3Q9UBC9 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.86■□□□□ 0.93
SPRR3Q9UBC9 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.86■□□□□ 0.93
SPRR3Q9UBC9 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.86■□□□□ 0.93
SPRR3Q9UBC9 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.86■□□□□ 0.93
SPRR3Q9UBC9 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SPRR3Q9UBC9 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SPRR3Q9UBC9 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SPRR3Q9UBC9 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
SPRR3Q9UBC9 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SPRR3Q9UBC9 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SPRR3Q9UBC9 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.85■□□□□ 0.93
SPRR3Q9UBC9 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.85■□□□□ 0.93
SPRR3Q9UBC9 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SPRR3Q9UBC9 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.85■□□□□ 0.93
SPRR3Q9UBC9 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
SPRR3Q9UBC9 AL136116.3-201ENST00000402907 1138 ntBASIC20.85■□□□□ 0.93
SPRR3Q9UBC9 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.85■□□□□ 0.93
SPRR3Q9UBC9 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.85■□□□□ 0.93
SPRR3Q9UBC9 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.85■□□□□ 0.93
SPRR3Q9UBC9 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.85■□□□□ 0.93
SPRR3Q9UBC9 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SPRR3Q9UBC9 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SPRR3Q9UBC9 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.85■□□□□ 0.93
SPRR3Q9UBC9 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SPRR3Q9UBC9 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SPRR3Q9UBC9 AC004448.1-201ENST00000458332 883 ntBASIC20.84■□□□□ 0.93
SPRR3Q9UBC9 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.84■□□□□ 0.93
SPRR3Q9UBC9 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.84■□□□□ 0.93
SPRR3Q9UBC9 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SPRR3Q9UBC9 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.83■□□□□ 0.93
SPRR3Q9UBC9 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SPRR3Q9UBC9 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.83■□□□□ 0.93
SPRR3Q9UBC9 AL512631.2-201ENST00000604634 923 ntBASIC20.83■□□□□ 0.93
SPRR3Q9UBC9 MIR4466-201ENST00000606121 54 ntBASIC20.83■□□□□ 0.93
SPRR3Q9UBC9 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.83■□□□□ 0.93
SPRR3Q9UBC9 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.83■□□□□ 0.93
SPRR3Q9UBC9 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
SPRR3Q9UBC9 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SPRR3Q9UBC9 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.83■□□□□ 0.92
SPRR3Q9UBC9 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
SPRR3Q9UBC9 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
SPRR3Q9UBC9 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SPRR3Q9UBC9 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
SPRR3Q9UBC9 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.82■□□□□ 0.92
SPRR3Q9UBC9 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
SPRR3Q9UBC9 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SPRR3Q9UBC9 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SPRR3Q9UBC9 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.82■□□□□ 0.92
SPRR3Q9UBC9 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
SPRR3Q9UBC9 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
SPRR3Q9UBC9 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SPRR3Q9UBC9 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SPRR3Q9UBC9 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SPRR3Q9UBC9 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SPRR3Q9UBC9 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SPRR3Q9UBC9 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
SPRR3Q9UBC9 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.81■□□□□ 0.92
SPRR3Q9UBC9 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SPRR3Q9UBC9 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.81■□□□□ 0.92
SPRR3Q9UBC9 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SPRR3Q9UBC9 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SPRR3Q9UBC9 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SPRR3Q9UBC9 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SPRR3Q9UBC9 AC131274.2-201ENST00000580697 1507 ntBASIC20.8■□□□□ 0.92
SPRR3Q9UBC9 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.8■□□□□ 0.92
SPRR3Q9UBC9 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SPRR3Q9UBC9 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SPRR3Q9UBC9 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SPRR3Q9UBC9 AC019069.1-201ENST00000610008 1333 ntBASIC20.79■□□□□ 0.92
SPRR3Q9UBC9 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms