Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 AL136967.2-201ENST00000623968 743 ntBASIC31.6■■■□□ 2.65
PHRF1Q9P1Y6 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
PHRF1Q9P1Y6 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
PHRF1Q9P1Y6 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
PHRF1Q9P1Y6 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC31.6■■■□□ 2.65
PHRF1Q9P1Y6 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
PHRF1Q9P1Y6 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC31.59■■■□□ 2.65
PHRF1Q9P1Y6 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC31.59■■■□□ 2.65
PHRF1Q9P1Y6 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC31.59■■■□□ 2.65
PHRF1Q9P1Y6 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
PHRF1Q9P1Y6 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC31.59■■■□□ 2.65
PHRF1Q9P1Y6 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
PHRF1Q9P1Y6 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
PHRF1Q9P1Y6 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
PHRF1Q9P1Y6 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC31.58■■■□□ 2.65
PHRF1Q9P1Y6 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC31.58■■■□□ 2.65
PHRF1Q9P1Y6 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC31.58■■■□□ 2.65
PHRF1Q9P1Y6 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC31.57■■■□□ 2.64
PHRF1Q9P1Y6 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
PHRF1Q9P1Y6 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
PHRF1Q9P1Y6 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
PHRF1Q9P1Y6 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
PHRF1Q9P1Y6 MIR6821-201ENST00000617625 74 ntBASIC31.56■■■□□ 2.64
PHRF1Q9P1Y6 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC31.55■■■□□ 2.64
PHRF1Q9P1Y6 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC31.55■■■□□ 2.64
PHRF1Q9P1Y6 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC31.55■■■□□ 2.64
PHRF1Q9P1Y6 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
PHRF1Q9P1Y6 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC31.54■■■□□ 2.64
PHRF1Q9P1Y6 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC31.54■■■□□ 2.64
PHRF1Q9P1Y6 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
PHRF1Q9P1Y6 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC31.54■■■□□ 2.64
PHRF1Q9P1Y6 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
PHRF1Q9P1Y6 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
PHRF1Q9P1Y6 AC004448.1-201ENST00000458332 883 ntBASIC31.53■■■□□ 2.64
PHRF1Q9P1Y6 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
PHRF1Q9P1Y6 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC31.53■■■□□ 2.64
PHRF1Q9P1Y6 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
PHRF1Q9P1Y6 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
PHRF1Q9P1Y6 PTCHD3P2-201ENST00000424937 1205 ntBASIC31.53■■■□□ 2.64
PHRF1Q9P1Y6 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
PHRF1Q9P1Y6 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC31.53■■■□□ 2.64
PHRF1Q9P1Y6 MIR4767-201ENST00000582827 78 ntBASIC31.53■■■□□ 2.64
PHRF1Q9P1Y6 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC31.52■■■□□ 2.64
PHRF1Q9P1Y6 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC31.52■■■□□ 2.64
PHRF1Q9P1Y6 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
PHRF1Q9P1Y6 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC31.52■■■□□ 2.64
PHRF1Q9P1Y6 AC097381.1-201ENST00000429019 1296 ntBASIC31.52■■■□□ 2.64
PHRF1Q9P1Y6 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
PHRF1Q9P1Y6 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC31.52■■■□□ 2.64
PHRF1Q9P1Y6 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
PHRF1Q9P1Y6 HYI-206ENST00000372434 1025 ntTSL 5 BASIC31.51■■■□□ 2.63
PHRF1Q9P1Y6 AC091305.1-201ENST00000479476 895 ntBASIC31.51■■■□□ 2.63
PHRF1Q9P1Y6 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC31.51■■■□□ 2.63
PHRF1Q9P1Y6 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
PHRF1Q9P1Y6 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC31.5■■■□□ 2.63
PHRF1Q9P1Y6 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
PHRF1Q9P1Y6 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC31.5■■■□□ 2.63
PHRF1Q9P1Y6 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC31.5■■■□□ 2.63
PHRF1Q9P1Y6 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC31.5■■■□□ 2.63
PHRF1Q9P1Y6 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC31.5■■■□□ 2.63
PHRF1Q9P1Y6 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
PHRF1Q9P1Y6 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
PHRF1Q9P1Y6 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC31.5■■■□□ 2.63
PHRF1Q9P1Y6 AC010501.1-201ENST00000606270 1962 ntBASIC31.5■■■□□ 2.63
PHRF1Q9P1Y6 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC31.49■■■□□ 2.63
PHRF1Q9P1Y6 AC087623.3-201ENST00000607047 1098 ntBASIC31.49■■■□□ 2.63
PHRF1Q9P1Y6 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC31.49■■■□□ 2.63
PHRF1Q9P1Y6 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
PHRF1Q9P1Y6 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
PHRF1Q9P1Y6 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
PHRF1Q9P1Y6 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC31.49■■■□□ 2.63
PHRF1Q9P1Y6 STOX2-205ENST00000513034 807 ntTSL 3 BASIC31.49■■■□□ 2.63
PHRF1Q9P1Y6 PLD4-205ENST00000553861 667 ntTSL 2 BASIC31.49■■■□□ 2.63
PHRF1Q9P1Y6 DUX4L19-201ENST00000557448 1267 ntBASIC31.49■■■□□ 2.63
PHRF1Q9P1Y6 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC31.48■■■□□ 2.63
PHRF1Q9P1Y6 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
PHRF1Q9P1Y6 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
PHRF1Q9P1Y6 SHF-206ENST00000560471 2499 ntTSL 5 BASIC31.48■■■□□ 2.63
PHRF1Q9P1Y6 AC097639.1-201ENST00000565519 1891 ntBASIC31.48■■■□□ 2.63
PHRF1Q9P1Y6 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC31.48■■■□□ 2.63
PHRF1Q9P1Y6 ERN1-208ENST00000606895 2068 ntBASIC31.47■■■□□ 2.63
PHRF1Q9P1Y6 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
PHRF1Q9P1Y6 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC31.47■■■□□ 2.63
PHRF1Q9P1Y6 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC31.47■■■□□ 2.63
PHRF1Q9P1Y6 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC31.47■■■□□ 2.63
PHRF1Q9P1Y6 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
PHRF1Q9P1Y6 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC31.47■■■□□ 2.63
PHRF1Q9P1Y6 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
PHRF1Q9P1Y6 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC31.47■■■□□ 2.63
PHRF1Q9P1Y6 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
PHRF1Q9P1Y6 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC31.46■■■□□ 2.63
PHRF1Q9P1Y6 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
PHRF1Q9P1Y6 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
PHRF1Q9P1Y6 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC31.46■■■□□ 2.63
PHRF1Q9P1Y6 AC027682.1-201ENST00000562846 899 ntBASIC31.46■■■□□ 2.63
PHRF1Q9P1Y6 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
PHRF1Q9P1Y6 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC31.45■■■□□ 2.63
PHRF1Q9P1Y6 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
PHRF1Q9P1Y6 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC31.45■■■□□ 2.63
PHRF1Q9P1Y6 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms