Protein–RNA interactions for Protein: Q9NZ09

UBAP1, Ubiquitin-associated protein 1, humanhuman

Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1Q9NZ09 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
UBAP1Q9NZ09 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
UBAP1Q9NZ09 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
UBAP1Q9NZ09 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
UBAP1Q9NZ09 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
UBAP1Q9NZ09 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
UBAP1Q9NZ09 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
UBAP1Q9NZ09 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
UBAP1Q9NZ09 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
UBAP1Q9NZ09 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
UBAP1Q9NZ09 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
UBAP1Q9NZ09 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
UBAP1Q9NZ09 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
UBAP1Q9NZ09 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.74■■□□□ 1.07
UBAP1Q9NZ09 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
UBAP1Q9NZ09 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.73■■□□□ 1.07
UBAP1Q9NZ09 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
UBAP1Q9NZ09 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
UBAP1Q9NZ09 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
UBAP1Q9NZ09 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
UBAP1Q9NZ09 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
UBAP1Q9NZ09 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.72■■□□□ 1.07
UBAP1Q9NZ09 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
UBAP1Q9NZ09 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.72■■□□□ 1.07
UBAP1Q9NZ09 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.72■■□□□ 1.07
UBAP1Q9NZ09 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.72■■□□□ 1.07
UBAP1Q9NZ09 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
UBAP1Q9NZ09 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.72■■□□□ 1.07
UBAP1Q9NZ09 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.72■■□□□ 1.07
UBAP1Q9NZ09 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
UBAP1Q9NZ09 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.71■■□□□ 1.07
UBAP1Q9NZ09 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.71■■□□□ 1.07
UBAP1Q9NZ09 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
UBAP1Q9NZ09 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
UBAP1Q9NZ09 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
UBAP1Q9NZ09 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
UBAP1Q9NZ09 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
UBAP1Q9NZ09 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
UBAP1Q9NZ09 AC137767.1-201ENST00000602918 1920 ntBASIC21.7■■□□□ 1.07
UBAP1Q9NZ09 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
UBAP1Q9NZ09 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.7■■□□□ 1.07
UBAP1Q9NZ09 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
UBAP1Q9NZ09 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.7■■□□□ 1.06
UBAP1Q9NZ09 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
UBAP1Q9NZ09 LINC00526-201ENST00000581067 1875 ntBASIC21.7■■□□□ 1.06
UBAP1Q9NZ09 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.7■■□□□ 1.06
UBAP1Q9NZ09 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
UBAP1Q9NZ09 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
UBAP1Q9NZ09 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
UBAP1Q9NZ09 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
UBAP1Q9NZ09 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.69■■□□□ 1.06
UBAP1Q9NZ09 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.69■■□□□ 1.06
UBAP1Q9NZ09 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
UBAP1Q9NZ09 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
UBAP1Q9NZ09 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.69■■□□□ 1.06
UBAP1Q9NZ09 AC016575.1-201ENST00000607026 382 ntBASIC21.69■■□□□ 1.06
UBAP1Q9NZ09 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
UBAP1Q9NZ09 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.69■■□□□ 1.06
UBAP1Q9NZ09 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.69■■□□□ 1.06
UBAP1Q9NZ09 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
UBAP1Q9NZ09 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.69■■□□□ 1.06
UBAP1Q9NZ09 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
UBAP1Q9NZ09 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
UBAP1Q9NZ09 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
UBAP1Q9NZ09 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.68■■□□□ 1.06
UBAP1Q9NZ09 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.68■■□□□ 1.06
UBAP1Q9NZ09 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.68■■□□□ 1.06
UBAP1Q9NZ09 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.68■■□□□ 1.06
UBAP1Q9NZ09 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC21.68■■□□□ 1.06
UBAP1Q9NZ09 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.68■■□□□ 1.06
UBAP1Q9NZ09 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.68■■□□□ 1.06
UBAP1Q9NZ09 MIR3648-2-201ENST00000581792 180 ntBASIC21.68■■□□□ 1.06
UBAP1Q9NZ09 MIR3648-1-201ENST00000615959 180 ntBASIC21.68■■□□□ 1.06
UBAP1Q9NZ09 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
UBAP1Q9NZ09 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC21.68■■□□□ 1.06
UBAP1Q9NZ09 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC21.68■■□□□ 1.06
UBAP1Q9NZ09 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
UBAP1Q9NZ09 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
UBAP1Q9NZ09 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
UBAP1Q9NZ09 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.67■■□□□ 1.06
UBAP1Q9NZ09 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
UBAP1Q9NZ09 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.67■■□□□ 1.06
UBAP1Q9NZ09 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
UBAP1Q9NZ09 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
UBAP1Q9NZ09 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
UBAP1Q9NZ09 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.67■■□□□ 1.06
UBAP1Q9NZ09 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
UBAP1Q9NZ09 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
UBAP1Q9NZ09 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
UBAP1Q9NZ09 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
UBAP1Q9NZ09 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.66■■□□□ 1.06
UBAP1Q9NZ09 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
UBAP1Q9NZ09 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
UBAP1Q9NZ09 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
UBAP1Q9NZ09 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
UBAP1Q9NZ09 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.66■■□□□ 1.06
UBAP1Q9NZ09 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
UBAP1Q9NZ09 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.66■■□□□ 1.06
UBAP1Q9NZ09 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
UBAP1Q9NZ09 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms