Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
KLHL1Q9NR64 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
KLHL1Q9NR64 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KLHL1Q9NR64 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KLHL1Q9NR64 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KLHL1Q9NR64 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KLHL1Q9NR64 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KLHL1Q9NR64 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.67■■□□□ 1.06
KLHL1Q9NR64 TSPY9P-201ENST00000440215 945 ntBASIC21.67■■□□□ 1.06
KLHL1Q9NR64 TSPY11P-201ENST00000442607 1045 ntBASIC21.67■■□□□ 1.06
KLHL1Q9NR64 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
KLHL1Q9NR64 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
KLHL1Q9NR64 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
KLHL1Q9NR64 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
KLHL1Q9NR64 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.66■■□□□ 1.06
KLHL1Q9NR64 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
KLHL1Q9NR64 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.66■■□□□ 1.06
KLHL1Q9NR64 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
KLHL1Q9NR64 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
KLHL1Q9NR64 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
KLHL1Q9NR64 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
KLHL1Q9NR64 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
KLHL1Q9NR64 MIR4281-201ENST00000580852 62 ntBASIC21.66■■□□□ 1.06
KLHL1Q9NR64 AC137630.3-201ENST00000607245 391 ntBASIC21.66■■□□□ 1.06
KLHL1Q9NR64 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.66■■□□□ 1.06
KLHL1Q9NR64 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
KLHL1Q9NR64 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
KLHL1Q9NR64 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.65■■□□□ 1.06
KLHL1Q9NR64 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
KLHL1Q9NR64 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
KLHL1Q9NR64 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
KLHL1Q9NR64 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
KLHL1Q9NR64 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.65■■□□□ 1.06
KLHL1Q9NR64 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.65■■□□□ 1.06
KLHL1Q9NR64 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
KLHL1Q9NR64 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
KLHL1Q9NR64 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
KLHL1Q9NR64 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
KLHL1Q9NR64 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.64■■□□□ 1.06
KLHL1Q9NR64 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
KLHL1Q9NR64 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
KLHL1Q9NR64 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.06
KLHL1Q9NR64 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
KLHL1Q9NR64 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.64■■□□□ 1.05
KLHL1Q9NR64 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
KLHL1Q9NR64 UNC93B8-201ENST00000511903 705 ntBASIC21.64■■□□□ 1.05
KLHL1Q9NR64 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
KLHL1Q9NR64 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
KLHL1Q9NR64 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.64■■□□□ 1.05
KLHL1Q9NR64 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.64■■□□□ 1.05
KLHL1Q9NR64 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
KLHL1Q9NR64 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
KLHL1Q9NR64 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.63■■□□□ 1.05
KLHL1Q9NR64 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
KLHL1Q9NR64 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
KLHL1Q9NR64 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
KLHL1Q9NR64 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
KLHL1Q9NR64 KRT16P3-201ENST00000439127 1283 ntBASIC21.62■■□□□ 1.05
KLHL1Q9NR64 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.62■■□□□ 1.05
KLHL1Q9NR64 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.62■■□□□ 1.05
KLHL1Q9NR64 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
KLHL1Q9NR64 AC021242.3-201ENST00000607598 1377 ntBASIC21.61■■□□□ 1.05
KLHL1Q9NR64 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
KLHL1Q9NR64 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
KLHL1Q9NR64 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
KLHL1Q9NR64 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.61■■□□□ 1.05
KLHL1Q9NR64 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.61■■□□□ 1.05
KLHL1Q9NR64 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.61■■□□□ 1.05
KLHL1Q9NR64 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.61■■□□□ 1.05
KLHL1Q9NR64 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
KLHL1Q9NR64 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
KLHL1Q9NR64 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
KLHL1Q9NR64 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
KLHL1Q9NR64 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.6■■□□□ 1.05
KLHL1Q9NR64 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
KLHL1Q9NR64 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
KLHL1Q9NR64 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
KLHL1Q9NR64 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.6■■□□□ 1.05
KLHL1Q9NR64 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.6■■□□□ 1.05
KLHL1Q9NR64 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.6■■□□□ 1.05
KLHL1Q9NR64 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
KLHL1Q9NR64 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
KLHL1Q9NR64 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.6■■□□□ 1.05
KLHL1Q9NR64 FOXO3B-201ENST00000395675 1928 ntBASIC21.59■■□□□ 1.05
KLHL1Q9NR64 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.59■■□□□ 1.05
KLHL1Q9NR64 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
KLHL1Q9NR64 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.59■■□□□ 1.05
KLHL1Q9NR64 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.59■■□□□ 1.05
KLHL1Q9NR64 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
KLHL1Q9NR64 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
KLHL1Q9NR64 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
KLHL1Q9NR64 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
KLHL1Q9NR64 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.58■■□□□ 1.05
KLHL1Q9NR64 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.58■■□□□ 1.05
KLHL1Q9NR64 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.58■■□□□ 1.05
KLHL1Q9NR64 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.58■■□□□ 1.05
KLHL1Q9NR64 AC011551.1-201ENST00000614101 683 ntBASIC21.58■■□□□ 1.05
KLHL1Q9NR64 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
KLHL1Q9NR64 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
KLHL1Q9NR64 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.58■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms