Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
CDH23Q9H251 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC25.08■■□□□ 1.61
CDH23Q9H251 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC25.08■■□□□ 1.61
CDH23Q9H251 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CDH23Q9H251 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC25.08■■□□□ 1.61
CDH23Q9H251 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
CDH23Q9H251 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.6
CDH23Q9H251 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC25.08■■□□□ 1.6
CDH23Q9H251 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
CDH23Q9H251 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CDH23Q9H251 DUX4L19-201ENST00000557448 1267 ntBASIC25.07■■□□□ 1.6
CDH23Q9H251 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC25.07■■□□□ 1.6
CDH23Q9H251 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CDH23Q9H251 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CDH23Q9H251 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC25.06■■□□□ 1.6
CDH23Q9H251 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC25.06■■□□□ 1.6
CDH23Q9H251 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CDH23Q9H251 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CDH23Q9H251 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CDH23Q9H251 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CDH23Q9H251 RAP2CP1-201ENST00000605103 478 ntBASIC25.05■■□□□ 1.6
CDH23Q9H251 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CDH23Q9H251 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC25.05■■□□□ 1.6
CDH23Q9H251 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CDH23Q9H251 SERBP1P1-201ENST00000396021 1160 ntBASIC25.05■■□□□ 1.6
CDH23Q9H251 AC004911.1-201ENST00000416316 871 ntBASIC25.05■■□□□ 1.6
CDH23Q9H251 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
CDH23Q9H251 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CDH23Q9H251 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC25.05■■□□□ 1.6
CDH23Q9H251 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CDH23Q9H251 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC25.04■■□□□ 1.6
CDH23Q9H251 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CDH23Q9H251 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CDH23Q9H251 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC25.03■■□□□ 1.6
CDH23Q9H251 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CDH23Q9H251 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC25.03■■□□□ 1.6
CDH23Q9H251 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CDH23Q9H251 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC25.03■■□□□ 1.6
CDH23Q9H251 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC25.03■■□□□ 1.6
CDH23Q9H251 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CDH23Q9H251 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC25.02■■□□□ 1.6
CDH23Q9H251 AC099791.1-201ENST00000416440 715 ntBASIC25.02■■□□□ 1.6
CDH23Q9H251 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC25.02■■□□□ 1.6
CDH23Q9H251 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
CDH23Q9H251 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CDH23Q9H251 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CDH23Q9H251 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC25.01■■□□□ 1.59
CDH23Q9H251 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC25.01■■□□□ 1.59
CDH23Q9H251 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC25.01■■□□□ 1.59
CDH23Q9H251 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC25■■□□□ 1.59
CDH23Q9H251 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC25■■□□□ 1.59
CDH23Q9H251 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
CDH23Q9H251 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC25■■□□□ 1.59
CDH23Q9H251 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC25■■□□□ 1.59
CDH23Q9H251 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC25■■□□□ 1.59
CDH23Q9H251 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC24.99■■□□□ 1.59
CDH23Q9H251 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
CDH23Q9H251 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
CDH23Q9H251 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC24.99■■□□□ 1.59
CDH23Q9H251 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CDH23Q9H251 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CDH23Q9H251 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
CDH23Q9H251 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
CDH23Q9H251 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC24.99■■□□□ 1.59
CDH23Q9H251 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CDH23Q9H251 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC24.99■■□□□ 1.59
CDH23Q9H251 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
CDH23Q9H251 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
CDH23Q9H251 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC24.98■■□□□ 1.59
CDH23Q9H251 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
CDH23Q9H251 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC24.98■■□□□ 1.59
CDH23Q9H251 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
CDH23Q9H251 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC24.98■■□□□ 1.59
CDH23Q9H251 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CDH23Q9H251 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
CDH23Q9H251 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC24.97■■□□□ 1.59
CDH23Q9H251 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC24.97■■□□□ 1.59
CDH23Q9H251 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC24.97■■□□□ 1.59
CDH23Q9H251 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC24.97■■□□□ 1.59
CDH23Q9H251 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC24.97■■□□□ 1.59
CDH23Q9H251 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
CDH23Q9H251 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC24.97■■□□□ 1.59
CDH23Q9H251 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
CDH23Q9H251 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CDH23Q9H251 PTCHD3P2-201ENST00000424937 1205 ntBASIC24.96■■□□□ 1.59
CDH23Q9H251 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC24.96■■□□□ 1.59
CDH23Q9H251 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CDH23Q9H251 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC24.96■■□□□ 1.59
CDH23Q9H251 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CDH23Q9H251 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC24.96■■□□□ 1.59
CDH23Q9H251 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
CDH23Q9H251 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CDH23Q9H251 EMC9-206ENST00000560403 872 ntTSL 2 BASIC24.96■■□□□ 1.59
CDH23Q9H251 AK1-201ENST00000223836 736 ntTSL 3 BASIC24.95■■□□□ 1.58
CDH23Q9H251 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC24.95■■□□□ 1.58
CDH23Q9H251 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC24.95■■□□□ 1.58
CDH23Q9H251 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CDH23Q9H251 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CDH23Q9H251 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC24.94■■□□□ 1.58
CDH23Q9H251 AC011298.3-201ENST00000615796 283 ntBASIC24.94■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms