Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHRDL1Q9BU40 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CHRDL1Q9BU40 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CHRDL1Q9BU40 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHRDL1Q9BU40 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CHRDL1Q9BU40 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC18.28■□□□□ 0.52
CHRDL1Q9BU40 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHRDL1Q9BU40 AC018755.3-202ENST00000596210 929 ntBASIC18.28■□□□□ 0.52
CHRDL1Q9BU40 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CHRDL1Q9BU40 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHRDL1Q9BU40 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHRDL1Q9BU40 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHRDL1Q9BU40 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC18.28■□□□□ 0.52
CHRDL1Q9BU40 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHRDL1Q9BU40 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CHRDL1Q9BU40 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHRDL1Q9BU40 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CHRDL1Q9BU40 DUX4L9-201ENST00000449051 1259 ntBASIC18.27■□□□□ 0.52
CHRDL1Q9BU40 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC18.27■□□□□ 0.52
CHRDL1Q9BU40 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
CHRDL1Q9BU40 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC18.27■□□□□ 0.52
CHRDL1Q9BU40 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CHRDL1Q9BU40 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC18.27■□□□□ 0.52
CHRDL1Q9BU40 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CHRDL1Q9BU40 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC18.27■□□□□ 0.51
CHRDL1Q9BU40 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CHRDL1Q9BU40 AP003733.4-201ENST00000623785 1697 ntBASIC18.26■□□□□ 0.51
CHRDL1Q9BU40 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHRDL1Q9BU40 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC18.26■□□□□ 0.51
CHRDL1Q9BU40 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC18.26■□□□□ 0.51
CHRDL1Q9BU40 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC18.26■□□□□ 0.51
CHRDL1Q9BU40 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHRDL1Q9BU40 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHRDL1Q9BU40 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHRDL1Q9BU40 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CHRDL1Q9BU40 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC18.26■□□□□ 0.51
CHRDL1Q9BU40 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHRDL1Q9BU40 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHRDL1Q9BU40 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHRDL1Q9BU40 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
CHRDL1Q9BU40 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC18.25■□□□□ 0.51
CHRDL1Q9BU40 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHRDL1Q9BU40 ABHD17AP5-201ENST00000580133 923 ntBASIC18.25■□□□□ 0.51
CHRDL1Q9BU40 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHRDL1Q9BU40 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
CHRDL1Q9BU40 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHRDL1Q9BU40 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHRDL1Q9BU40 AC079834.2-201ENST00000609776 1949 ntBASIC18.25■□□□□ 0.51
CHRDL1Q9BU40 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHRDL1Q9BU40 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHRDL1Q9BU40 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHRDL1Q9BU40 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHRDL1Q9BU40 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHRDL1Q9BU40 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHRDL1Q9BU40 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CHRDL1Q9BU40 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CHRDL1Q9BU40 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHRDL1Q9BU40 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHRDL1Q9BU40 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHRDL1Q9BU40 KRT18P60-201ENST00000312876 1297 ntBASIC18.24■□□□□ 0.51
CHRDL1Q9BU40 RPS2P7-201ENST00000447334 885 ntBASIC18.24■□□□□ 0.51
CHRDL1Q9BU40 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHRDL1Q9BU40 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHRDL1Q9BU40 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC18.24■□□□□ 0.51
CHRDL1Q9BU40 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CHRDL1Q9BU40 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC18.24■□□□□ 0.51
CHRDL1Q9BU40 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHRDL1Q9BU40 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC18.24■□□□□ 0.51
CHRDL1Q9BU40 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CHRDL1Q9BU40 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHRDL1Q9BU40 FOXO3B-201ENST00000395675 1928 ntBASIC18.23■□□□□ 0.51
CHRDL1Q9BU40 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHRDL1Q9BU40 MIR6765-201ENST00000614092 87 ntBASIC18.23■□□□□ 0.51
CHRDL1Q9BU40 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHRDL1Q9BU40 AC129492.7-201ENST00000622992 756 ntBASIC18.23■□□□□ 0.51
CHRDL1Q9BU40 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHRDL1Q9BU40 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHRDL1Q9BU40 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHRDL1Q9BU40 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC18.22■□□□□ 0.51
CHRDL1Q9BU40 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CHRDL1Q9BU40 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHRDL1Q9BU40 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CHRDL1Q9BU40 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC18.22■□□□□ 0.51
CHRDL1Q9BU40 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC18.22■□□□□ 0.51
CHRDL1Q9BU40 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC18.22■□□□□ 0.51
CHRDL1Q9BU40 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC18.22■□□□□ 0.51
CHRDL1Q9BU40 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHRDL1Q9BU40 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
CHRDL1Q9BU40 EED-207ENST00000528180 1745 ntTSL 5 BASIC18.21■□□□□ 0.51
CHRDL1Q9BU40 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHRDL1Q9BU40 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHRDL1Q9BU40 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHRDL1Q9BU40 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CHRDL1Q9BU40 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHRDL1Q9BU40 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHRDL1Q9BU40 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.21■□□□□ 0.5
CHRDL1Q9BU40 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC18.2■□□□□ 0.5
CHRDL1Q9BU40 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHRDL1Q9BU40 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CHRDL1Q9BU40 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms