Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CALR3Q96L12 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC24.52■■□□□ 1.52
CALR3Q96L12 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
CALR3Q96L12 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC24.52■■□□□ 1.52
CALR3Q96L12 AL161729.1-201ENST00000604104 1402 ntBASIC24.52■■□□□ 1.52
CALR3Q96L12 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CALR3Q96L12 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC24.51■■□□□ 1.51
CALR3Q96L12 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CALR3Q96L12 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CALR3Q96L12 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CALR3Q96L12 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC24.51■■□□□ 1.51
CALR3Q96L12 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC24.51■■□□□ 1.51
CALR3Q96L12 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CALR3Q96L12 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC24.51■■□□□ 1.51
CALR3Q96L12 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
CALR3Q96L12 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CALR3Q96L12 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
CALR3Q96L12 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CALR3Q96L12 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CALR3Q96L12 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
CALR3Q96L12 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CALR3Q96L12 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CALR3Q96L12 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CALR3Q96L12 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CALR3Q96L12 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CALR3Q96L12 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CALR3Q96L12 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC24.49■■□□□ 1.51
CALR3Q96L12 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
CALR3Q96L12 AC133552.2-201ENST00000619106 1032 ntBASIC24.49■■□□□ 1.51
CALR3Q96L12 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
CALR3Q96L12 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CALR3Q96L12 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CALR3Q96L12 AC009831.1-201ENST00000580420 1582 ntBASIC24.49■■□□□ 1.51
CALR3Q96L12 ABCB10P4-201ENST00000566803 2184 ntBASIC24.49■■□□□ 1.51
CALR3Q96L12 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
CALR3Q96L12 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
CALR3Q96L12 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
CALR3Q96L12 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC24.48■■□□□ 1.51
CALR3Q96L12 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CALR3Q96L12 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CALR3Q96L12 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CALR3Q96L12 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
CALR3Q96L12 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC24.47■■□□□ 1.51
CALR3Q96L12 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CALR3Q96L12 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
CALR3Q96L12 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC24.47■■□□□ 1.51
CALR3Q96L12 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CALR3Q96L12 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
CALR3Q96L12 RPS2P7-201ENST00000447334 885 ntBASIC24.47■■□□□ 1.51
CALR3Q96L12 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC24.47■■□□□ 1.51
CALR3Q96L12 SSSCA1-AS1-201ENST00000567594 614 ntBASIC24.47■■□□□ 1.51
CALR3Q96L12 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC24.47■■□□□ 1.51
CALR3Q96L12 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
CALR3Q96L12 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CALR3Q96L12 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
CALR3Q96L12 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
CALR3Q96L12 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC24.47■■□□□ 1.51
CALR3Q96L12 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC24.47■■□□□ 1.51
CALR3Q96L12 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
CALR3Q96L12 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CALR3Q96L12 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CALR3Q96L12 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CALR3Q96L12 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC24.46■■□□□ 1.51
CALR3Q96L12 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC24.46■■□□□ 1.51
CALR3Q96L12 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
CALR3Q96L12 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.51
CALR3Q96L12 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
CALR3Q96L12 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CALR3Q96L12 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
CALR3Q96L12 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
CALR3Q96L12 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CALR3Q96L12 RNF126P1-201ENST00000567452 1320 ntBASIC24.44■■□□□ 1.5
CALR3Q96L12 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CALR3Q96L12 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC24.44■■□□□ 1.5
CALR3Q96L12 AC090877.2-201ENST00000558441 1738 ntBASIC24.44■■□□□ 1.5
CALR3Q96L12 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
CALR3Q96L12 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC24.44■■□□□ 1.5
CALR3Q96L12 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CALR3Q96L12 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CALR3Q96L12 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
CALR3Q96L12 AC018755.3-202ENST00000596210 929 ntBASIC24.43■■□□□ 1.5
CALR3Q96L12 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CALR3Q96L12 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CALR3Q96L12 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC24.43■■□□□ 1.5
CALR3Q96L12 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CALR3Q96L12 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CALR3Q96L12 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CALR3Q96L12 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CALR3Q96L12 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC24.42■■□□□ 1.5
CALR3Q96L12 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CALR3Q96L12 AC079834.2-201ENST00000609776 1949 ntBASIC24.42■■□□□ 1.5
CALR3Q96L12 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
CALR3Q96L12 AL592295.1-201ENST00000400984 884 ntBASIC24.42■■□□□ 1.5
CALR3Q96L12 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC24.42■■□□□ 1.5
CALR3Q96L12 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
CALR3Q96L12 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
CALR3Q96L12 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CALR3Q96L12 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CALR3Q96L12 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CALR3Q96L12 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC24.42■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms