Protein–RNA interactions for Protein: Q96KK3

KCNS1, Potassium voltage-gated channel subfamily S member 1, humanhuman

Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNS1Q96KK3 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
KCNS1Q96KK3 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KCNS1Q96KK3 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
KCNS1Q96KK3 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
KCNS1Q96KK3 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KCNS1Q96KK3 PKD1P6-201ENST00000343738 4769 ntBASIC17.56■□□□□ 0.4
KCNS1Q96KK3 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
KCNS1Q96KK3 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KCNS1Q96KK3 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KCNS1Q96KK3 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
KCNS1Q96KK3 MED25-210ENST00000612854 801 ntTSL 5 BASIC17.56■□□□□ 0.4
KCNS1Q96KK3 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
KCNS1Q96KK3 MED25-214ENST00000622402 642 ntTSL 5 BASIC17.56■□□□□ 0.4
KCNS1Q96KK3 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KCNS1Q96KK3 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
KCNS1Q96KK3 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC17.56■□□□□ 0.4
KCNS1Q96KK3 AC141586.4-201ENST00000624558 1573 ntBASIC17.56■□□□□ 0.4
KCNS1Q96KK3 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC17.56■□□□□ 0.4
KCNS1Q96KK3 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KCNS1Q96KK3 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
KCNS1Q96KK3 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
KCNS1Q96KK3 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KCNS1Q96KK3 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC17.55■□□□□ 0.4
KCNS1Q96KK3 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
KCNS1Q96KK3 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
KCNS1Q96KK3 MACF1-219ENST00000484793 834 ntTSL 2 BASIC17.55■□□□□ 0.4
KCNS1Q96KK3 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC17.55■□□□□ 0.4
KCNS1Q96KK3 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KCNS1Q96KK3 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KCNS1Q96KK3 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KCNS1Q96KK3 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
KCNS1Q96KK3 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
KCNS1Q96KK3 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KCNS1Q96KK3 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC17.54■□□□□ 0.4
KCNS1Q96KK3 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
KCNS1Q96KK3 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
KCNS1Q96KK3 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
KCNS1Q96KK3 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
KCNS1Q96KK3 GDI1-215ENST00000630693 786 ntTSL 4 BASIC17.54■□□□□ 0.4
KCNS1Q96KK3 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KCNS1Q96KK3 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
KCNS1Q96KK3 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KCNS1Q96KK3 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
KCNS1Q96KK3 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
KCNS1Q96KK3 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
KCNS1Q96KK3 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC17.53■□□□□ 0.4
KCNS1Q96KK3 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
KCNS1Q96KK3 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC17.53■□□□□ 0.4
KCNS1Q96KK3 EP400NL-214ENST00000641289 2402 ntBASIC17.53■□□□□ 0.4
KCNS1Q96KK3 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KCNS1Q96KK3 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
KCNS1Q96KK3 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
KCNS1Q96KK3 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
KCNS1Q96KK3 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
KCNS1Q96KK3 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
KCNS1Q96KK3 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
KCNS1Q96KK3 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
KCNS1Q96KK3 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC17.52■□□□□ 0.4
KCNS1Q96KK3 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.52■□□□□ 0.4
KCNS1Q96KK3 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC17.52■□□□□ 0.4
KCNS1Q96KK3 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
KCNS1Q96KK3 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
KCNS1Q96KK3 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
KCNS1Q96KK3 ABHD17AP4-201ENST00000411545 909 ntBASIC17.52■□□□□ 0.4
KCNS1Q96KK3 MIR3648-2-201ENST00000581792 180 ntBASIC17.52■□□□□ 0.4
KCNS1Q96KK3 MIR3648-1-201ENST00000615959 180 ntBASIC17.52■□□□□ 0.4
KCNS1Q96KK3 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
KCNS1Q96KK3 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
KCNS1Q96KK3 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
KCNS1Q96KK3 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
KCNS1Q96KK3 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
KCNS1Q96KK3 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
KCNS1Q96KK3 NFE2L3P1-201ENST00000588207 1959 ntBASIC17.51■□□□□ 0.39
KCNS1Q96KK3 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KCNS1Q96KK3 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC17.51■□□□□ 0.39
KCNS1Q96KK3 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KCNS1Q96KK3 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
KCNS1Q96KK3 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KCNS1Q96KK3 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KCNS1Q96KK3 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
KCNS1Q96KK3 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
KCNS1Q96KK3 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KCNS1Q96KK3 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC17.51■□□□□ 0.39
KCNS1Q96KK3 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
KCNS1Q96KK3 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KCNS1Q96KK3 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KCNS1Q96KK3 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
KCNS1Q96KK3 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
KCNS1Q96KK3 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
KCNS1Q96KK3 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KCNS1Q96KK3 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
KCNS1Q96KK3 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC17.5■□□□□ 0.39
KCNS1Q96KK3 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
KCNS1Q96KK3 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
KCNS1Q96KK3 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KCNS1Q96KK3 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KCNS1Q96KK3 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
KCNS1Q96KK3 GALC-202ENST00000393568 2054 ntTSL 2 BASIC17.49■□□□□ 0.39
KCNS1Q96KK3 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC17.49■□□□□ 0.39
KCNS1Q96KK3 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms