Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CPNE4Q96A23 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.82■□□□□ 0.92
CPNE4Q96A23 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CPNE4Q96A23 AC021242.3-201ENST00000607598 1377 ntBASIC20.82■□□□□ 0.92
CPNE4Q96A23 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CPNE4Q96A23 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CPNE4Q96A23 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CPNE4Q96A23 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CPNE4Q96A23 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CPNE4Q96A23 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CPNE4Q96A23 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
CPNE4Q96A23 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CPNE4Q96A23 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.81■□□□□ 0.92
CPNE4Q96A23 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.81■□□□□ 0.92
CPNE4Q96A23 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.81■□□□□ 0.92
CPNE4Q96A23 AF131216.4-201ENST00000638924 1588 ntBASIC20.8■□□□□ 0.92
CPNE4Q96A23 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CPNE4Q96A23 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CPNE4Q96A23 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.8■□□□□ 0.92
CPNE4Q96A23 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
CPNE4Q96A23 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CPNE4Q96A23 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.8■□□□□ 0.92
CPNE4Q96A23 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.8■□□□□ 0.92
CPNE4Q96A23 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.8■□□□□ 0.92
CPNE4Q96A23 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.8■□□□□ 0.92
CPNE4Q96A23 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CPNE4Q96A23 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
CPNE4Q96A23 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CPNE4Q96A23 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CPNE4Q96A23 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CPNE4Q96A23 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.79■□□□□ 0.92
CPNE4Q96A23 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.79■□□□□ 0.92
CPNE4Q96A23 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CPNE4Q96A23 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CPNE4Q96A23 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CPNE4Q96A23 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CPNE4Q96A23 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.79■□□□□ 0.92
CPNE4Q96A23 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.79■□□□□ 0.92
CPNE4Q96A23 MIR4787-201ENST00000607364 84 ntBASIC20.79■□□□□ 0.92
CPNE4Q96A23 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CPNE4Q96A23 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CPNE4Q96A23 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CPNE4Q96A23 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CPNE4Q96A23 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CPNE4Q96A23 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CPNE4Q96A23 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.78■□□□□ 0.92
CPNE4Q96A23 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CPNE4Q96A23 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CPNE4Q96A23 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CPNE4Q96A23 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CPNE4Q96A23 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CPNE4Q96A23 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CPNE4Q96A23 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CPNE4Q96A23 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.77■□□□□ 0.92
CPNE4Q96A23 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.77■□□□□ 0.92
CPNE4Q96A23 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CPNE4Q96A23 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CPNE4Q96A23 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CPNE4Q96A23 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CPNE4Q96A23 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.76■□□□□ 0.91
CPNE4Q96A23 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.76■□□□□ 0.91
CPNE4Q96A23 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.75■□□□□ 0.91
CPNE4Q96A23 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CPNE4Q96A23 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CPNE4Q96A23 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CPNE4Q96A23 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.75■□□□□ 0.91
CPNE4Q96A23 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.75■□□□□ 0.91
CPNE4Q96A23 GUSBP5-201ENST00000418136 578 ntBASIC20.75■□□□□ 0.91
CPNE4Q96A23 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CPNE4Q96A23 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.75■□□□□ 0.91
CPNE4Q96A23 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.75■□□□□ 0.91
CPNE4Q96A23 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CPNE4Q96A23 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CPNE4Q96A23 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CPNE4Q96A23 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CPNE4Q96A23 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.74■□□□□ 0.91
CPNE4Q96A23 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CPNE4Q96A23 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.74■□□□□ 0.91
CPNE4Q96A23 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CPNE4Q96A23 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CPNE4Q96A23 AC138932.3-201ENST00000567634 1902 ntBASIC20.74■□□□□ 0.91
CPNE4Q96A23 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CPNE4Q96A23 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CPNE4Q96A23 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CPNE4Q96A23 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.73■□□□□ 0.91
CPNE4Q96A23 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.73■□□□□ 0.91
CPNE4Q96A23 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CPNE4Q96A23 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.73■□□□□ 0.91
CPNE4Q96A23 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CPNE4Q96A23 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.72■□□□□ 0.91
CPNE4Q96A23 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CPNE4Q96A23 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CPNE4Q96A23 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.72■□□□□ 0.91
CPNE4Q96A23 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CPNE4Q96A23 AC092028.1-203ENST00000608262 953 ntBASIC20.72■□□□□ 0.91
CPNE4Q96A23 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CPNE4Q96A23 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CPNE4Q96A23 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CPNE4Q96A23 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CPNE4Q96A23 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms