Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
SMARCC1Q92922 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC30.12■■■□□ 2.41
SMARCC1Q92922 MIR6821-201ENST00000617625 74 ntBASIC30.12■■■□□ 2.41
SMARCC1Q92922 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC30.12■■■□□ 2.41
SMARCC1Q92922 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
SMARCC1Q92922 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC30.11■■■□□ 2.41
SMARCC1Q92922 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
SMARCC1Q92922 AC092171.4-201ENST00000609130 632 ntBASIC30.11■■■□□ 2.41
SMARCC1Q92922 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC30.11■■■□□ 2.41
SMARCC1Q92922 AC097639.1-201ENST00000565519 1891 ntBASIC30.1■■■□□ 2.41
SMARCC1Q92922 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
SMARCC1Q92922 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
SMARCC1Q92922 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
SMARCC1Q92922 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
SMARCC1Q92922 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
SMARCC1Q92922 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC30.09■■■□□ 2.41
SMARCC1Q92922 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC30.09■■■□□ 2.41
SMARCC1Q92922 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC30.08■■■□□ 2.41
SMARCC1Q92922 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
SMARCC1Q92922 SYT6-210ENST00000641643 1587 ntBASIC30.08■■■□□ 2.41
SMARCC1Q92922 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
SMARCC1Q92922 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
SMARCC1Q92922 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC30.08■■■□□ 2.41
SMARCC1Q92922 ANKRD20A6P-201ENST00000618763 204 ntBASIC30.08■■■□□ 2.41
SMARCC1Q92922 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
SMARCC1Q92922 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC30.07■■■□□ 2.4
SMARCC1Q92922 PARL-206ENST00000435888 1098 ntTSL 5 BASIC30.07■■■□□ 2.4
SMARCC1Q92922 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC30.07■■■□□ 2.4
SMARCC1Q92922 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC30.06■■■□□ 2.4
SMARCC1Q92922 AC097381.1-201ENST00000429019 1296 ntBASIC30.06■■■□□ 2.4
SMARCC1Q92922 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC30.06■■■□□ 2.4
SMARCC1Q92922 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC30.06■■■□□ 2.4
SMARCC1Q92922 STOX2-205ENST00000513034 807 ntTSL 3 BASIC30.05■■■□□ 2.4
SMARCC1Q92922 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC30.05■■■□□ 2.4
SMARCC1Q92922 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC30.04■■■□□ 2.4
SMARCC1Q92922 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC30.04■■■□□ 2.4
SMARCC1Q92922 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC30.04■■■□□ 2.4
SMARCC1Q92922 MIR4767-201ENST00000582827 78 ntBASIC30.04■■■□□ 2.4
SMARCC1Q92922 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC30.04■■■□□ 2.4
SMARCC1Q92922 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC30.03■■■□□ 2.4
SMARCC1Q92922 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
SMARCC1Q92922 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC30.03■■■□□ 2.4
SMARCC1Q92922 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
SMARCC1Q92922 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC30.03■■■□□ 2.4
SMARCC1Q92922 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
SMARCC1Q92922 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
SMARCC1Q92922 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC30.02■■■□□ 2.4
SMARCC1Q92922 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC30.02■■■□□ 2.4
SMARCC1Q92922 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
SMARCC1Q92922 RASA4CP-201ENST00000424092 1398 ntBASIC30.02■■■□□ 2.4
SMARCC1Q92922 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC30.01■■■□□ 2.4
SMARCC1Q92922 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC30.01■■■□□ 2.4
SMARCC1Q92922 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC30.01■■■□□ 2.4
SMARCC1Q92922 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC30.01■■■□□ 2.39
SMARCC1Q92922 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
SMARCC1Q92922 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC30.01■■■□□ 2.39
SMARCC1Q92922 PTMA-205ENST00000410064 814 ntTSL 2 BASIC30.01■■■□□ 2.39
SMARCC1Q92922 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC30.01■■■□□ 2.39
SMARCC1Q92922 CA15P2-201ENST00000611168 834 ntBASIC30.01■■■□□ 2.39
SMARCC1Q92922 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC30.01■■■□□ 2.39
SMARCC1Q92922 AC096887.2-201ENST00000623443 1957 ntBASIC30.01■■■□□ 2.39
SMARCC1Q92922 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC30■■■□□ 2.39
SMARCC1Q92922 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC30■■■□□ 2.39
SMARCC1Q92922 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC30■■■□□ 2.39
SMARCC1Q92922 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC30■■■□□ 2.39
SMARCC1Q92922 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC30■■■□□ 2.39
SMARCC1Q92922 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC30■■■□□ 2.39
SMARCC1Q92922 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
SMARCC1Q92922 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
SMARCC1Q92922 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
SMARCC1Q92922 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
SMARCC1Q92922 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
SMARCC1Q92922 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC29.98■■■□□ 2.39
SMARCC1Q92922 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC29.98■■■□□ 2.39
SMARCC1Q92922 REST-206ENST00000612429 1376 ntTSL 5 BASIC29.98■■■□□ 2.39
SMARCC1Q92922 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC29.98■■■□□ 2.39
SMARCC1Q92922 REST-207ENST00000616975 1370 ntTSL 5 BASIC29.98■■■□□ 2.39
SMARCC1Q92922 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC29.98■■■□□ 2.39
SMARCC1Q92922 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC29.97■■■□□ 2.39
SMARCC1Q92922 SERBP1P1-201ENST00000396021 1160 ntBASIC29.97■■■□□ 2.39
SMARCC1Q92922 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
SMARCC1Q92922 MAG-206ENST00000597035 542 ntTSL 4 BASIC29.97■■■□□ 2.39
SMARCC1Q92922 AC087623.3-201ENST00000607047 1098 ntBASIC29.97■■■□□ 2.39
SMARCC1Q92922 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
SMARCC1Q92922 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC29.97■■■□□ 2.39
SMARCC1Q92922 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
SMARCC1Q92922 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC29.96■■■□□ 2.39
SMARCC1Q92922 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC29.96■■■□□ 2.39
SMARCC1Q92922 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC29.96■■■□□ 2.39
SMARCC1Q92922 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC29.96■■■□□ 2.39
SMARCC1Q92922 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC29.96■■■□□ 2.39
SMARCC1Q92922 PLD4-205ENST00000553861 667 ntTSL 2 BASIC29.96■■■□□ 2.39
SMARCC1Q92922 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC29.96■■■□□ 2.39
SMARCC1Q92922 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
SMARCC1Q92922 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC29.96■■■□□ 2.39
SMARCC1Q92922 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC29.95■■■□□ 2.39
SMARCC1Q92922 AC027682.1-201ENST00000562846 899 ntBASIC29.95■■■□□ 2.39
SMARCC1Q92922 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC29.95■■■□□ 2.39
SMARCC1Q92922 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
SMARCC1Q92922 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms