Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
SH3RF3Q8TEJ3 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC27.82■■■□□ 2.04
SH3RF3Q8TEJ3 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC27.82■■■□□ 2.04
SH3RF3Q8TEJ3 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC27.82■■■□□ 2.04
SH3RF3Q8TEJ3 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC27.82■■■□□ 2.04
SH3RF3Q8TEJ3 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC27.82■■■□□ 2.04
SH3RF3Q8TEJ3 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
SH3RF3Q8TEJ3 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC27.81■■■□□ 2.04
SH3RF3Q8TEJ3 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC27.81■■■□□ 2.04
SH3RF3Q8TEJ3 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC27.81■■■□□ 2.04
SH3RF3Q8TEJ3 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC27.81■■■□□ 2.04
SH3RF3Q8TEJ3 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC27.81■■■□□ 2.04
SH3RF3Q8TEJ3 AL356740.2-201ENST00000601559 647 ntBASIC27.81■■■□□ 2.04
SH3RF3Q8TEJ3 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
SH3RF3Q8TEJ3 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC27.8■■■□□ 2.04
SH3RF3Q8TEJ3 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
SH3RF3Q8TEJ3 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC27.8■■■□□ 2.04
SH3RF3Q8TEJ3 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC27.8■■■□□ 2.04
SH3RF3Q8TEJ3 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC27.8■■■□□ 2.04
SH3RF3Q8TEJ3 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC27.8■■■□□ 2.04
SH3RF3Q8TEJ3 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
SH3RF3Q8TEJ3 TFPT-201ENST00000391757 774 ntTSL 5 BASIC27.79■■■□□ 2.04
SH3RF3Q8TEJ3 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC27.79■■■□□ 2.04
SH3RF3Q8TEJ3 AK3-203ENST00000447596 705 ntTSL 2 BASIC27.79■■■□□ 2.04
SH3RF3Q8TEJ3 QDPR-206ENST00000508623 601 ntTSL 3 BASIC27.79■■■□□ 2.04
SH3RF3Q8TEJ3 MIR4466-201ENST00000606121 54 ntBASIC27.79■■■□□ 2.04
SH3RF3Q8TEJ3 MIR6722-201ENST00000617286 78 ntBASIC27.79■■■□□ 2.04
SH3RF3Q8TEJ3 RASSF1-AS1-201ENST00000629828 790 ntBASIC27.79■■■□□ 2.04
SH3RF3Q8TEJ3 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
SH3RF3Q8TEJ3 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC27.78■■■□□ 2.04
SH3RF3Q8TEJ3 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
SH3RF3Q8TEJ3 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
SH3RF3Q8TEJ3 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
SH3RF3Q8TEJ3 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
SH3RF3Q8TEJ3 AL136116.3-201ENST00000402907 1138 ntBASIC27.78■■■□□ 2.04
SH3RF3Q8TEJ3 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC27.78■■■□□ 2.04
SH3RF3Q8TEJ3 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC27.78■■■□□ 2.04
SH3RF3Q8TEJ3 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC27.77■■■□□ 2.04
SH3RF3Q8TEJ3 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
SH3RF3Q8TEJ3 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
SH3RF3Q8TEJ3 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC27.77■■■□□ 2.04
SH3RF3Q8TEJ3 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
SH3RF3Q8TEJ3 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC27.76■■■□□ 2.04
SH3RF3Q8TEJ3 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC27.76■■■□□ 2.04
SH3RF3Q8TEJ3 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC27.76■■■□□ 2.03
SH3RF3Q8TEJ3 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC27.76■■■□□ 2.03
SH3RF3Q8TEJ3 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC27.76■■■□□ 2.03
SH3RF3Q8TEJ3 AL512631.2-201ENST00000604634 923 ntBASIC27.76■■■□□ 2.03
SH3RF3Q8TEJ3 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC27.76■■■□□ 2.03
SH3RF3Q8TEJ3 MIR6089-201ENST00000616698 64 ntBASIC27.76■■■□□ 2.03
SH3RF3Q8TEJ3 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC27.76■■■□□ 2.03
SH3RF3Q8TEJ3 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC27.76■■■□□ 2.03
SH3RF3Q8TEJ3 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC27.76■■■□□ 2.03
SH3RF3Q8TEJ3 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC27.76■■■□□ 2.03
SH3RF3Q8TEJ3 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
SH3RF3Q8TEJ3 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
SH3RF3Q8TEJ3 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
SH3RF3Q8TEJ3 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
SH3RF3Q8TEJ3 AC004448.1-201ENST00000458332 883 ntBASIC27.75■■■□□ 2.03
SH3RF3Q8TEJ3 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC27.75■■■□□ 2.03
SH3RF3Q8TEJ3 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
SH3RF3Q8TEJ3 AC019069.1-201ENST00000610008 1333 ntBASIC27.74■■■□□ 2.03
SH3RF3Q8TEJ3 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC27.74■■■□□ 2.03
SH3RF3Q8TEJ3 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
SH3RF3Q8TEJ3 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC27.74■■■□□ 2.03
SH3RF3Q8TEJ3 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC27.74■■■□□ 2.03
SH3RF3Q8TEJ3 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
SH3RF3Q8TEJ3 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC27.74■■■□□ 2.03
SH3RF3Q8TEJ3 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
SH3RF3Q8TEJ3 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC27.73■■■□□ 2.03
SH3RF3Q8TEJ3 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC27.73■■■□□ 2.03
SH3RF3Q8TEJ3 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC27.73■■■□□ 2.03
SH3RF3Q8TEJ3 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
SH3RF3Q8TEJ3 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
SH3RF3Q8TEJ3 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC27.72■■■□□ 2.03
SH3RF3Q8TEJ3 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC27.72■■■□□ 2.03
SH3RF3Q8TEJ3 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
SH3RF3Q8TEJ3 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC27.72■■■□□ 2.03
SH3RF3Q8TEJ3 LSR-205ENST00000427250 1606 ntTSL 2 BASIC27.71■■■□□ 2.03
SH3RF3Q8TEJ3 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC27.71■■■□□ 2.03
SH3RF3Q8TEJ3 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
SH3RF3Q8TEJ3 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
SH3RF3Q8TEJ3 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC27.71■■■□□ 2.03
SH3RF3Q8TEJ3 AC131274.2-201ENST00000580697 1507 ntBASIC27.71■■■□□ 2.03
SH3RF3Q8TEJ3 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
SH3RF3Q8TEJ3 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC27.7■■■□□ 2.02
SH3RF3Q8TEJ3 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
SH3RF3Q8TEJ3 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
SH3RF3Q8TEJ3 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
SH3RF3Q8TEJ3 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
SH3RF3Q8TEJ3 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC27.69■■■□□ 2.02
SH3RF3Q8TEJ3 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
SH3RF3Q8TEJ3 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
SH3RF3Q8TEJ3 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC27.68■■■□□ 2.02
SH3RF3Q8TEJ3 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
SH3RF3Q8TEJ3 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
SH3RF3Q8TEJ3 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
SH3RF3Q8TEJ3 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
SH3RF3Q8TEJ3 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC27.68■■■□□ 2.02
SH3RF3Q8TEJ3 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC27.68■■■□□ 2.02
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms